Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun4g02416 | ATGCCTGCCATGAAAAAGAATACTGAGCAGACTCATTTTGGATCTGTATTCAACAAGTTGTTGAAGGAGCTTCAAGAACCTGTTGACTTTGAACTTCCAGATTGGTTTAAATCGAAACCAATGCAGTACACCTATATAAAACGCAATATATATCTCACCAAGAAGGTCAAGAGATCCCGGTTTGAGGATGATGGCATATTCTGTTCCTGTACTTCTGCTGGATCTACTAGTGTATGTGGTAGAGATTGCCATTGTGGTATGCTTCTGTCTAGCTGTTCATCAGGCTGTAAATGTGGGAGCTCTTGTCTTAACAAACCATTCCAGAATCGCCCAGTGAAAAAGATGAAATTGGTTCAGACTGAGAAATGTGGTTCTGGTATTGTGGCGGATGAAGATATCAAACACGGGGAGTTTGTTATAGAATATGTTGGAGAAGTCATTGATGACAGAACATGTGAGGAAAGGCTTTGGAACATGAAACATCGTGGGGAAACAAATTTCTACTTATGTGAAATCAATCGAGATATGGTGATAGATGCAACATATAAGGGAAACAAATCAAGATACATCAACCATAGTTGCTGTCCCAATACTGAGATGCAGAAATGGATAATTGATGGTGAAACCAGAATTGGCATATTTGCAACTCGTGACATACAAAAGGGCGAGCATCTGACTTACGATTACCAGTTTGTTCAGTTTGGTGCAGATCAAGATTGTCACTGTGGTGCTGCTGCATGTAGGCGTAAATTGGGTGTTCGACCTACCAAACCTAAAATGTCTTCAGATGCTGCATTAAAATTAGTTGCATACCAGGTTTATCAGAATGGACGTTTGCAAATTGGTGGTTCCCGTGTTGACCACCGAAAATGCTTACACAATTGCATTGGTGAAGTTATTAGAATAAAACTCTTTGAAAAGGAGAGGTTTGGAGTCATTAAACGGTTTGATAAATATTCTCGAAAACATTCAATCATGTTCGAGGATGGTCATGTTGAAATTTATGACATGTCAAAAGAGGACTGGGAGCTTGTGAGATAG | 1041 | 0.3958 | MPAMKKNTEQTHFGSVFNKLLKELQEPVDFELPDWFKSKPMQYTYIKRNIYLTKKVKRSRFEDDGIFCSCTSAGSTSVCGRDCHCGMLLSSCSSGCKCGSSCLNKPFQNRPVKKMKLVQTEKCGSGIVADEDIKHGEFVIEYVGEVIDDRTCEERLWNMKHRGETNFYLCEINRDMVIDATYKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIQKGEHLTYDYQFVQFGADQDCHCGAAACRRKLGVRPTKPKMSSDAALKLVAYQVYQNGRLQIGGSRVDHRKCLHNCIGEVIRIKLFEKERFGVIKRFDKYSRKHSIMFEDGHVEIYDMSKEDWELVR | 346 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun4g02416 | 346 | SMART | shorttest3 | 63 | 112 | IPR006560 | GO:0005634|GO:0042054 | |
Viun4g02416 | 346 | PANTHER | SET DOMAIN PROTEINS | 26 | 265 | - | - | |
Viun4g02416 | 346 | CDD | SET_ASHR3-like | 114 | 252 | - | - | |
Viun4g02416 | 346 | Pfam | SET domain | 124 | 229 | IPR001214 | GO:0005515 | |
Viun4g02416 | 346 | SUPERFAMILY | SET domain | 38 | 248 | IPR046341 | - | |
Viun4g02416 | 346 | ProSiteProfiles | AWS domain profile. | 63 | 111 | IPR006560 | GO:0005634|GO:0042054 | |
Viun4g02416 | 346 | ProSiteProfiles | SET domain profile. | 113 | 230 | IPR001214 | GO:0005515 | |
Viun4g02416 | 346 | ProSiteProfiles | Post-SET domain profile. | 236 | 252 | IPR003616 | - | |
Viun4g02416 | 346 | SMART | set_7 | 113 | 236 | IPR001214 | GO:0005515 | |
Viun4g02416 | 346 | ProSiteProfiles | Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. | 37 | 290 | IPR025787 | - | |
Viun4g02416 | 346 | FunFam | Histone-lysine N-methyltransferase | 30 | 268 | - | - | |
Viun4g02416 | 346 | Gene3D | SET domain | 17 | 268 | IPR046341 | - | |
Viun4g02416 | 346 | SMART | PostSET_3 | 236 | 252 | IPR003616 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun4g02416 | Viun-Chr4 | 39414265 | 39422996 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun4g02416 | 86 | 251 | C2H2 Transcription Factor Family | AT2G23740 | 34.946 | 3.41e-23 | 99.4 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | SET | Viun4g02416 | SET | 1e-19 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun4g02416 | - | - | gmx:100808183 | 654.055 |