Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02390 ATGGAATGCAATAAGGATGAGGCTACCAGGGCTAAAGAAATTGCGGAGAGGAAGTTTGCTGCAAAGGATATATCAGGTGCAAAGAAATTTGCTTTGAAGGCCCTAAATCTATTTCCTGAACTTGAGGGTATTTCTCAAATGGTAGCAACACTTGATGTATATATTTCTGCTGAGAATAAAGCAAACGGAGAAGCAGATTGGTACGGTGTACTTGGTGTGGATTCCCTTGCTGACGATGATACAGTAAGGAGACAATACAGGAAGTTAGCTCTCATGCTTCACCCTGATAAGAACAAGTCTATCGGTGCTGATGGGGCCTTTAAACTTGTGTCAGAGGCATGGAGTTTACTATCAGATAGGGCTAAAAGAACAGCATATGATAAGAGAAGTGGAAAAGAACGGAAAGTTTCTACCAAGTTTGGAGGTTCATCAGCACAAAAAGGCACTAATGGTAGTTACAATTTTACCAAGACTACCCCTTCAAGTGCAACTGCTCAGAAGAACACCGCTAAAGAACACACTTCATCTTCTGCTCATAAGTCAAAATCTAATACATTTTGGACTGTTTGCACTAGGTGCAAAATGCAGTACGAGTATCTTAGAGTTTATCTAAACCTTAAGCTCTTATGTCCCAGCTGCCGTACAGCATTTGTTGCTGTAGAGACTGCTCCTCCACCTGCAAGTGGTATTAGGCCTGCAACTCAATGGAATTTTACACAGAAGAAGCAAAATTCCAATCGCCAAGTACCTAGTAAAAGCAAATCAAATGTCGGAAAGCATGACATGGCTGCCCCAAATGTTGGAGCAGGGTCTTATAATAATACTGACACAGCCAGTTTCCAATGGGCTCCATTCTCAAAGTCATCTGGTGTTTCCAACGCTGCTCAAGCTGCAAGTGTGGTTCAGCAAGCATATGACAAAGTGAGGCGAGATCGTGAGGAGGCACAAGCGGCTAGCAAAAGGGAAGAGGCCTTAAAAAGGAAGCAGCAAGCTTCTAAAAAGGGTTACTATAATCCTGCTAAGAGAAGAAGAGGGGGCACAGAGGATGCAAGTGCAAGTGGTGGTAAGGAAAACCGAATGGGTGGGGGAACAAACTCATCTAAACAGGCTAATTTTGAATATAATAGGGTTAATGGAATCAACAAGGCTGACAGTGTGGGGGATATCTCCCCGGTTGAACTTCGGAATCTTCTTATGGAGAAAGCTAGAAAAGAAATTAGCAATAAACTCCGGGAAAATCAGTCAAATGCTGTTGATAAAACATTGAAGAAAGAGAGTGGAAATAACTTCTGTAAAGTAAACGATAAAGGAGAAAAAATCCTAAGAAATTCTGAAATGTGTGCTCAAGATAACACTGCCATCAAGTCGTTTGCAGGCTCTACAATTGCTAAAGGTAATAGAAAATTTCTAGAAACAACAGCTATAGATGTACCAGATTCTGACTTCCATGATTTTTACAAAGACCGAACTGAAGTATCTTTCACTGAAAACCAAGTATGGGCTGTATATGATAACGACGACGGGATGCCTCGATGTTATGCTATGATTCGTGGCATCATCTCCCTGAATCCATTCAAGATAAAGATCAGTTGGCTCAACCCAAACACCAACAGTAAACTGGACCCCATTAAATGGGTTGCTTCAGGATTTTCAAAAATATGTGGGGATTTCAGATTGAGCAGACCTGAAATCTGTAGCTCGCCCAACTTTTTCTCCCACAAGGTTAGATGGAGAACAGGTGCTGATGGGGCTATTTGTATATATCCCAGGAAAGGGGATGTTTGGGCCTTATACAGGAATTGGTCTCCTGACTGGGATGAGCTAACACCAGACGAGGTTATACACAAGTTTGATGTGGTTGAAGTACTTGAGGATTTTATTGAAGGGCATGGCATAGATGTTATCCCACTGCTCAAAGTGGCTGGATTCAGGACGGTATTTCACCACCACTTAGATCCAACAGAAATCAGGATCATTCCGATGGAAGAGATGTTTCGATTCTCTCATCAAATACCTTCATATGTACTCACTGGTCAAGAAGCTCCAGATGCTCCAAAGGGTTGCAGGGTGTTGGACCCAGCTGCTACTCCAATAGAGTTTCTTCAGCTAATAGAAGTTGTGAAGGAGGAAGAAGACCTGGCAGACAAAGATGAAACTGATGTCAAAGAACTAAGTGATAACATGAAAAAAGATAGAAATGAGGAAATGATCGACTATATGGGAAAAATTGAGGAAGAAAAGGAGGGGAAGGATGAAGACATGCAGGAAGTAGATACAAGTGAAAACATGACAAAAGCTAATAATGAGGAAATGATCAATGATGTGGGGAAACATGGGGAAGGAAAGCAGGGAAAGGACAAAGATATGCAGTCAGTAGAAACTTTGGAAGAGGACAGAGAGAAACAAGATATGCAGTAG 2418 0.4173 MECNKDEATRAKEIAERKFAAKDISGAKKFALKALNLFPELEGISQMVATLDVYISAENKANGEADWYGVLGVDSLADDDTVRRQYRKLALMLHPDKNKSIGADGAFKLVSEAWSLLSDRAKRTAYDKRSGKERKVSTKFGGSSAQKGTNGSYNFTKTTPSSATAQKNTAKEHTSSSAHKSKSNTFWTVCTRCKMQYEYLRVYLNLKLLCPSCRTAFVAVETAPPPASGIRPATQWNFTQKKQNSNRQVPSKSKSNVGKHDMAAPNVGAGSYNNTDTASFQWAPFSKSSGVSNAAQAASVVQQAYDKVRRDREEAQAASKREEALKRKQQASKKGYYNPAKRRRGGTEDASASGGKENRMGGGTNSSKQANFEYNRVNGINKADSVGDISPVELRNLLMEKARKEISNKLRENQSNAVDKTLKKESGNNFCKVNDKGEKILRNSEMCAQDNTAIKSFAGSTIAKGNRKFLETTAIDVPDSDFHDFYKDRTEVSFTENQVWAVYDNDDGMPRCYAMIRGIISLNPFKIKISWLNPNTNSKLDPIKWVASGFSKICGDFRLSRPEICSSPNFFSHKVRWRTGADGAICIYPRKGDVWALYRNWSPDWDELTPDEVIHKFDVVEVLEDFIEGHGIDVIPLLKVAGFRTVFHHHLDPTEIRIIPMEEMFRFSHQIPSYVLTGQEAPDAPKGCRVLDPAATPIEFLQLIEVVKEEEDLADKDETDVKELSDNMKKDRNEEMIDYMGKIEEEKEGKDEDMQEVDTSENMTKANNEEMINDVGKHGEGKQGKDKDMQSVETLEEDREKQDMQ 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02390 805 MobiDBLite consensus disorder prediction 311 330 - -
Viun4g02390 805 Pfam DnaJ domain 66 127 IPR001623 -
Viun4g02390 805 MobiDBLite consensus disorder prediction 225 270 - -
Viun4g02390 805 Pfam Domain of unknown function (DUF3444) 473 680 IPR024593 -
Viun4g02390 805 PANTHER BNAC03G44070D PROTEIN 1 697 - -
Viun4g02390 805 MobiDBLite consensus disorder prediction 311 369 - -
Viun4g02390 805 PRINTS DnaJ domain signature 86 101 IPR001623 -
Viun4g02390 805 PRINTS DnaJ domain signature 102 122 IPR001623 -
Viun4g02390 805 PRINTS DnaJ domain signature 68 86 IPR001623 -
Viun4g02390 805 Coils Coil 707 734 - -
Viun4g02390 805 MobiDBLite consensus disorder prediction 771 805 - -
Viun4g02390 805 MobiDBLite consensus disorder prediction 232 255 - -
Viun4g02390 805 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Viun4g02390 805 MobiDBLite consensus disorder prediction 741 759 - -
Viun4g02390 805 Gene3D DnaJ domain 63 184 IPR036869 -
Viun4g02390 805 SUPERFAMILY Chaperone J-domain 60 126 IPR036869 -
Viun4g02390 805 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Viun4g02390 805 SMART dnaj_3 65 122 IPR001623 -
Viun4g02390 805 Coils Coil 305 328 - -
Viun4g02390 805 MobiDBLite consensus disorder prediction 741 805 - -
Viun4g02390 805 MobiDBLite consensus disorder prediction 127 178 - -
Viun4g02390 805 MobiDBLite consensus disorder prediction 137 172 - -
Viun4g02390 805 CDD DnaJ 66 119 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02390 Viun-Chr4 39285764 39290301 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02390 4 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.906 2.58e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02390 - - gmx:100816712 1295.41