Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02337 ATGATCCAAGAGCTCGTAAGCACATCCATGGCTTCCTGTAACATTTTCTTCCTCTTTATCCTTGTTAGCTTCCTCACTTTTGCAACTGCTCACGCACAGTCCGACTCCGACCCTGTCTATCTATTCCACAATTGCCCTATGGGCAACACAACAGATGGCAGCACCTTCCAATCCAATCTCAACATCCTACTCTCCTCCTTATCAGATAACGCCCCCGACAACAACGGATTCTACAACAACACTGTCTCTGGACAAAACCCCTCGGACTCTGTCTTTGGACTTTTCATGTGCAGGGGTGACGTCCCTTCTCAGCTTTGTCACCAATGTGTCCAAAATGCAACCCACCGATTATCCTCAGAGTGTTCCTTGGCTAAGCAAGCTGTGATTTGGTACGATGAGTGCACCGTTCGTTACTCCAACAACTCATTCTTCTCCACTTTCTCCACCAGACCTAGAATTGGCCTGTTGAACACTGCTAATATCTCAAACCAGGAAAGTTTCATGACTTTACTGTTTCAGACCATGAACAAAACTGCAAATGAAGCCGCTGCTGCTGTCGGTAACAAGTTTGCAACAAGGCAAGCATATATTTCTGGATTTCAGAACCTTTATTGTCTAGCTCAGTGCACTCCGGACTTGTCACTCAGTGACTGTAGAAGGTGTCTGAGTGGAGTGATAGGGGACCTTCCCTGGTGCTGCCAGGGGAAGCAGGGAGGGAGAGTTCTATACCCCAGCTGTAATGTTAGGTATGAACTTTACCCTTTCTATCGCTCCATAGAAGGACCTGAAGATTCAGGATTTTCAGAAGATCCAACTTATCTAAACCACAATTGCTCAACTAATGTAACTGCTGGCAGCACTTTCAAAATGTATGTAGAGACCCTCCTCACTTACATGTCCACCAATGCCACCGATGGAAAAATGTTTTATAAGGGCAGCGTGGAGAACATTGTGAATGGGCTCTTCATGTGCCAAGGTGGTCTTCCATCTGGGCTCTGTCAACAATGCGTCACCAAAGCAACCCTCCGAATATCCTCAGCGTGCAATTCGTTTCAAGAGGGTGTAATTTGGTACAGCCATTGCATGCTTCGCTATTCCTATCGCTATTTCTTCTCCCGAGTACAAAAAATCCCAACTTTTCAACTGTTGAAAGTCACCAGTGCCTCCAGCTCCGCCCCTGAGCAAGAGTTCTTCGCTTTTACACTATCAACTATGTTGGCTAATCTGGCGAAGGAGACACAGGATAGTGATGAGAGATATCTGACTAAATCATCGAAATTGAATGCTTTACAAACGCTTTATGCGTTAAGCCAATGTACGCAGGATTTATCTAGTGATGATTGTAGGGGCTGTTTGGAAGATATAAATGGAAATATCCCTTGGTCTCTCTTGGGAAGCGTGGGGGGAAGAGTTTTGAATCCCAGTTGCAGTCTCAGGTTTGAATTGTTCCAATTTTACGGCTTTGGTGACCAACCTCAACGGCCAAAATCAGGTGATCCTTCTCCATCTCCCCACAAAGTTGGTAATGAAAGTGTCACTTTAGAGCCATTGCAATTCAGTTTGACGGTAATTGAAGTTGCAACCAACAACTTCTCAAAGGAGAATAGGATTGGAAAAGGTGGATTTGGAGAAGTTTATAAGGGTATTCTCCTTGATGGACGACAAATCGCAGTAAAGAAACTGTCAAAAAGTTCTAAGCAAGGTGCAAATGAGTTCAAGAATGAAGTTTTATTGATAGCCAAACTTCAACATAGAAATCTTGTGACATTTATTGGTTTTTGTCTTGAAGATCAAAACAAAATTCTAATATATGAATATGTGCTGAACAAGAGTCTCGACTATTTTTTATTTGATTCTCAACAAGCAAATTTGTTAGGATGGTCTGATCGTTATAACATTATTGGAGGGATTGCTCGCGGAATTCTTTATTTACATGAATATTCTCGACTCAAAGTCATACATGGTGATCTTAAACCTAGTAATATCTTATTAGATGAAAATATGATTCCAAAAATTTCAGATTTTGGTTTGGCTAGAATTATTGAAATACATGAAGACCAAGCGAGTACAAATAGAATTGTTGGAACATATGGTTACATGTCTCCAGAATATGCGATGCTCGGACATTTTTCAGAAAAATCAGATGTTTTTAGTTTTGGTGTCATGGTTTTAGAAATTATCACTGGAAAAAGGAATGCAAATTCTTATGATCAACCATATGGTGTTGGTGATGGCCTGTCAAGTTATGTTTGGAGACAATGGAGGAGTGATAGCTTGTGTATATTAGACCCTAGTATTAAAGAAAAATATTGTGAAGAAGAAGTTATTAAATGCACTCAAATTGGTTTATTATGTGTTCAACAAAATCCTGATGCAAGACCAACAATGATGGAAGTTGTTTCATATTTTAGCAATCATTCGATTGAATTGCCAGATCCAGAAGAACCTGCATTCTTCTTGCATGGTAGAATGGATTCAAGACCAGTTCCACATTCCAAACAACATACCAATGGCCACACCCCATTTTCCATTAATGAAATGCCAACGAGTCAATTTCTTCCTCGATAG 2568 0.4104 MIQELVSTSMASCNIFFLFILVSFLTFATAHAQSDSDPVYLFHNCPMGNTTDGSTFQSNLNILLSSLSDNAPDNNGFYNNTVSGQNPSDSVFGLFMCRGDVPSQLCHQCVQNATHRLSSECSLAKQAVIWYDECTVRYSNNSFFSTFSTRPRIGLLNTANISNQESFMTLLFQTMNKTANEAAAAVGNKFATRQAYISGFQNLYCLAQCTPDLSLSDCRRCLSGVIGDLPWCCQGKQGGRVLYPSCNVRYELYPFYRSIEGPEDSGFSEDPTYLNHNCSTNVTAGSTFKMYVETLLTYMSTNATDGKMFYKGSVENIVNGLFMCQGGLPSGLCQQCVTKATLRISSACNSFQEGVIWYSHCMLRYSYRYFFSRVQKIPTFQLLKVTSASSSAPEQEFFAFTLSTMLANLAKETQDSDERYLTKSSKLNALQTLYALSQCTQDLSSDDCRGCLEDINGNIPWSLLGSVGGRVLNPSCSLRFELFQFYGFGDQPQRPKSGDPSPSPHKVGNESVTLEPLQFSLTVIEVATNNFSKENRIGKGGFGEVYKGILLDGRQIAVKKLSKSSKQGANEFKNEVLLIAKLQHRNLVTFIGFCLEDQNKILIYEYVLNKSLDYFLFDSQQANLLGWSDRYNIIGGIARGILYLHEYSRLKVIHGDLKPSNILLDENMIPKISDFGLARIIEIHEDQASTNRIVGTYGYMSPEYAMLGHFSEKSDVFSFGVMVLEIITGKRNANSYDQPYGVGDGLSSYVWRQWRSDSLCILDPSIKEKYCEEEVIKCTQIGLLCVQQNPDARPTMMEVVSYFSNHSIELPDPEEPAFFLHGRMDSRPVPHSKQHTNGHTPFSINEMPTSQFLPR 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02337 855 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 494 606 - -
Viun4g02337 855 FunFam cysteine-rich receptor-like protein kinase 10 607 810 - -
Viun4g02337 855 ProSitePatterns Serine/Threonine protein kinases active-site signature. 652 664 IPR008271 GO:0004672|GO:0006468
Viun4g02337 855 Gene3D Transferase(Phosphotransferase) domain 1 608 811 - -
Viun4g02337 855 ProSiteProfiles Gnk2-homologous domain profile. 379 485 IPR002902 -
Viun4g02337 855 FunFam Cysteine-rich receptor-like protein kinase 25 379 485 - -
Viun4g02337 855 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 38 142 - -
Viun4g02337 855 MobiDBLite consensus disorder prediction 833 855 - -
Viun4g02337 855 FunFam Cysteine-rich receptor-like protein kinase 25 151 255 - -
Viun4g02337 855 Pfam Salt stress response/antifungal 278 366 IPR002902 -
Viun4g02337 855 Pfam Salt stress response/antifungal 160 253 IPR002902 -
Viun4g02337 855 Pfam Salt stress response/antifungal 393 481 IPR002902 -
Viun4g02337 855 Pfam Salt stress response/antifungal 48 140 IPR002902 -
Viun4g02337 855 Gene3D Phosphorylase Kinase; domain 1 502 606 - -
Viun4g02337 855 SMART serkin_6 531 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun4g02337 855 Gene3D - 37 143 IPR038408 -
Viun4g02337 855 Gene3D - 152 255 IPR038408 -
Viun4g02337 855 Gene3D - 271 370 IPR038408 -
Viun4g02337 855 Gene3D - 380 485 IPR038408 -
Viun4g02337 855 ProSiteProfiles Gnk2-homologous domain profile. 38 143 IPR002902 -
Viun4g02337 855 ProSiteProfiles Gnk2-homologous domain profile. 270 370 IPR002902 -
Viun4g02337 855 ProSiteProfiles Gnk2-homologous domain profile. 149 255 IPR002902 -
Viun4g02337 855 Pfam Protein kinase domain 532 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun4g02337 855 SUPERFAMILY Protein kinase-like (PK-like) 513 833 IPR011009 -
Viun4g02337 855 MobiDBLite consensus disorder prediction 829 855 - -
Viun4g02337 855 CDD STKc_IRAK 537 803 - -
Viun4g02337 855 ProSiteProfiles Protein kinase domain profile. 531 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun4g02337 855 ProSitePatterns Protein kinases ATP-binding region signature. 537 560 IPR017441 GO:0005524
Viun4g02337 855 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 263 830 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02337 Viun-Chr4 38966565 38971456 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02337 268 855 Receptor kinase-like Gene Family AT4G23150 40.062 4.05e-148 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun4g02337 Pkinase 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02337 - - gmx:100798426 1142.1