Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02335 ATGGCCAAGATCATAATGGGAAACATGGGTTGTTTTCTTACAAGCTGTCTCCTAGTTCTAACAATGTTGTTCTCTGCAAATGCTCAATTTGCCAAGAAGACTTACCTCGTTCAAATGGATAAGTCAGTAATGCCAAAAGCCTTATCCAACCACCTTGAATGGTATTCATCAAAGCTGAAATCGGCACTGTCCACATCTCCAGAAGAAACTGATGCGGAGAGTGAGAAGAGAATTATCTACACTTACCAGAATGCTTTTCATGGTGTTGCAGCTAAGTTGACTGAAGGAGAAGCTAAGAAGCTAGAGGCTGAAGAAGGAGTTGTGGCCATATTCCCAGACACAAAGTATGAGCTACACACCACAAGAAGTCCTGCATTCCTCAGGCTTGAACCAGCAAAAGCCCCTAACATGTGGTCAGAAAAGTTTTCTGGCCATGATGTTATAGTGGGAGTGTTGGACACTGGGATTTGGCCAGAGAGTGATAGCTTCAAAGATGTAGGCATGGGACCAGTACCTGCTCGTTGGAAAGGTGCCTGTGAGATTGGAACAGGCTTCACAAAAAGTCACTGCAATAGAAAGGTTGTGGGGGCAAGAGTGTTCTACCATGGATATGAAGCAGCAATTGGTAGAATTAATGAGCAGAAGGAGTACAAATCACCAAGAGATCAAGATGGGCATGGCACTCACACAGCAGCTACAGTTGGTGGCTCTCCTGTGCTTGGGGCTAACCTTCTTGGTTATGCTAATGGCACAGCAAGAGGAATGGCACCAGGTTCAAGGATTGCAGCTTACAAAGTGTGTTGGATTGGTGGGTGCTTCAGCTCAGATATTGTGTCAGCTATTGATGCAGCTGTGGCTGATGGAGTGGATATTCTTTCCATCTCTTTGGGTGGTGGAGTCTCCTCTTATTACCGTGACAGTTTATCTGTTGCTGCATTTGGAGCAATGGAGAAGGGTGTTTTTGTTTCATGTTCTGCAGGAAATGCAGGACCTGATCCTGCAAGCCTCACCAATGTTTCACCATGGATCACCACAGTTGGAGCCAGCACAATGGATAGAGATTTTCCAGCAGAAGTAAAGCTTGGAAATGGTAAAGTAGTGACAGGAGTTTCACTCTACAAAGGGCAAAGTGTGCTTTCAATTCAGAAACAATACCCTTTGGTGTACTTGGGGAGCAACTCTAGCAGGGTTGATCCAAGATCCATGTGCTTGGAAGGGACTTTGGATCCTAAAGTGGTTTCAGGAAAGATAGTTGTTTGTGATAGAGGCCTTAGTCCTAGAGTGCAAAAGGGTTATGTGGTGAGAAGTGCAGGAGGGGTGGGAATGATTCTCACAAACACCGAAGCCAATGGAGAAGAACTAGTTGCTGATTGCCACCTCCTTCCAGCAGTTGCTATAGGAGAAAAAGAAGGAAAAGATCTCAAAAGCTATGTCCTATCTAGTAAAAGTGCTACTGCAACTCTAGCTTTTAAAGGTACTAGGTTGGGAATAAGGCCATCTCCTGTAGTGGCAGCATTTTCATCAAGAGGGCCAAATTTTCTGAGCCTTGAAATTCTGAAGCCTGATTTAGTGGCTCCTGGGGTGAACATTCTTGCTGCATGGAGTGAGGCCATTGGTCCATCAGGTTTGAAAGTGGACAACAGAAAAGAGAAGTTCAATATACTCTCTGGAACCTCAATGTCATGCCCACATGTGAGTGGTGTAGCAGCTTTTCTTAAAGCCAATCACCCTGAGTGGAGCCCTGCTGCTATAAAATCTGCTTTGATGACTACTGCTTACGTTCTTGACAACACCAGAAAAACTCTCACAGATGCCTCAACTGCTAAACCTTCAAGTCCTTATGATCATGGTTCTGGACACATTGACCCTATCAGAGCTCTTGACCCTGGTTTGGTATATGACATTGAGCCACAAGACTACTTTGAATTCCTATGCACACAGAATCTGACTCCAACCCAACTTCAAGTTTTTGCCAAATACTCCAACAGATCTTGCAAACACTCTCTTCCCAGTCCAGGGGACTTGAACTACCCAGCCATATCATCAATCTTTACTCAGAAAACACCCACTTCATTCTCCAGTCCTGTCATTGTTCACAGAACTGTCACCAATGTTGGCCCTCCTGATTCCAAATACCAAGTTGTTGTCTCTCCATTCGAAGGTGCTTCTGTCAAAGTTGAGCCAGAAACTCTGAATTTCACAAAACAACACCAAAAGCTGTCTTACAAGATTACATTCACACCAAGGGTTCGGCAAACATCTCCAGAATTTGGAAGTTTGATATGGAAGGATGGTTTGCACACTGTGAGAAGCCCCATTGTGATAACATGGCTGGCACCACCAATGTGA 2349 0.4461 MAKIIMGNMGCFLTSCLLVLTMLFSANAQFAKKTYLVQMDKSVMPKALSNHLEWYSSKLKSALSTSPEETDAESEKRIIYTYQNAFHGVAAKLTEGEAKKLEAEEGVVAIFPDTKYELHTTRSPAFLRLEPAKAPNMWSEKFSGHDVIVGVLDTGIWPESDSFKDVGMGPVPARWKGACEIGTGFTKSHCNRKVVGARVFYHGYEAAIGRINEQKEYKSPRDQDGHGTHTAATVGGSPVLGANLLGYANGTARGMAPGSRIAAYKVCWIGGCFSSDIVSAIDAAVADGVDILSISLGGGVSSYYRDSLSVAAFGAMEKGVFVSCSAGNAGPDPASLTNVSPWITTVGASTMDRDFPAEVKLGNGKVVTGVSLYKGQSVLSIQKQYPLVYLGSNSSRVDPRSMCLEGTLDPKVVSGKIVVCDRGLSPRVQKGYVVRSAGGVGMILTNTEANGEELVADCHLLPAVAIGEKEGKDLKSYVLSSKSATATLAFKGTRLGIRPSPVVAAFSSRGPNFLSLEILKPDLVAPGVNILAAWSEAIGPSGLKVDNRKEKFNILSGTSMSCPHVSGVAAFLKANHPEWSPAAIKSALMTTAYVLDNTRKTLTDASTAKPSSPYDHGSGHIDPIRALDPGLVYDIEPQDYFEFLCTQNLTPTQLQVFAKYSNRSCKHSLPSPGDLNYPAISSIFTQKTPTSFSSPVIVHRTVTNVGPPDSKYQVVVSPFEGASVKVEPETLNFTKQHQKLSYKITFTPRVRQTSPEFGSLIWKDGLHTVRSPIVITWLAPPM 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02335 782 CDD PA_subtilisin_like 359 488 - -
Viun4g02335 782 Gene3D - 644 778 - -
Viun4g02335 782 Gene3D - 352 496 - -
Viun4g02335 782 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Viun4g02335 782 Pfam PA domain 384 474 IPR003137 -
Viun4g02335 782 FunFam Subtilisin-like protease SBT1.5 146 364 - -
Viun4g02335 782 ProSiteProfiles Serine proteases, subtilase domain profile. 123 627 - -
Viun4g02335 782 ProSitePatterns Serine proteases, subtilase family, serine active site. 557 567 IPR023828 -
Viun4g02335 782 FunFam Subtilisin-like protease SBT1.9 23 119 - -
Viun4g02335 782 SUPERFAMILY Subtilisin-like 118 631 IPR036852 GO:0004252|GO:0006508
Viun4g02335 782 CDD Peptidases_S8_3 116 593 IPR034197 -
Viun4g02335 782 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 44 774 IPR045051 -
Viun4g02335 782 Gene3D Peptidase S8/S53 domain 146 640 IPR036852 GO:0004252|GO:0006508
Viun4g02335 782 Pfam Subtilase family 144 600 IPR000209 GO:0006508|GO:0008236
Viun4g02335 782 Pfam Fibronectin type-III domain 674 775 IPR041469 -
Viun4g02335 782 FunFam subtilisin-like protease SBT1.5 352 495 - -
Viun4g02335 782 Pfam Peptidase inhibitor I9 34 119 IPR010259 -
Viun4g02335 782 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 119 IPR037045 -
Viun4g02335 782 PRINTS Subtilisin serine protease family (S8) signature 222 235 IPR015500 -
Viun4g02335 782 PRINTS Subtilisin serine protease family (S8) signature 556 572 IPR015500 -
Viun4g02335 782 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02335 Viun-Chr4 38952860 38955487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02335 32 780 Subtilisin-like Serine Gene Family AT5G51750 69.200 0.0 1089
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02335 - - gmx:100794709 1388.63