Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02322 ATGCCCCTCTTCTCTTTCTCCCATTACAAATTCCTTTGGAGATGTTCAATTGCATTTGCATTTTTCTTAACCCTTTTCTTCATTGCAAACTCACTCACTCTCCAACCCCAATCCACTTCAACACCATGCAACAAAGACCCCTACAAGCAACTCAATCTAATCCTTAACCAAAACGGCACCGTCACACGCCCCAACAAACCCCCCGACAGCCCGCCCGCAGCGGATCCCTCTCTCCTCGTACTCTCCAAAGACCTCTCCATCAACCAATCCAAGGGCACATGGGCGCGGGTGTACCTTCCCCGCGCAGCACAGGATCACCGCTCCAAGCTCCCCCTGGTGGTTTTCTTCCATGGTGGAGGGTTCATTTTTCTCAGTGCAGCCTCAACGATCTTCCACGAGTTTTGCTTCAACATGGCAAATGACGTCGATGCGGTCGTAGTGTCCGTGGAGTACCGTCTCGCACCGGAACATAGACTACCCGCGGCGTACGATGATGCCGTGGAGGCGCTGCAGTGGATAAAAGCCAGCCAGGATAACTGGCTCAAAAACCTCGTCGATTACTCCAATGTTTTTCTCATGGGGAGTAGTGCCGGGGGAAACATCGCCTACAACGCCGGTCTACGTGTAGCCGCGGCTGCCGACGACAAGATTCCTGAGATCAAAGGGCTTATTTTGGTTCAACCGTTTTTCAGTGGGACCCACAGGACAGGTTCGGAGCGGAGGCTGGCGAACGAACCTCATCTGGGGCTGTGCTTTAATGACGCGATGTGGGAGTTGTCATTACCGGTTGGGGTTGACCGTGATCACAAGTATTGCAATCCGACGGCGGGGAAGGGTCGTGCGAGATTGGAATTGATCAAAAGGCTTGGATGGTGGGTCCTGGTTACCGGATGTGGAGGTGACCCGCTGGTGGATCGTCAGGTGCATCTTGTTAAGTTGATGCAAGAGAAGGGTGTGAAAGTTGTGGGGCATTTCACCCCAGGGGATTATCATGGGATTCAAGATAGTGAACCATTGAAGGCAAAGGTGCTATATGGAGTTATCAAAACTTTCATTTCAGCTTTAAATTAA 1071 0.5163 MPLFSFSHYKFLWRCSIAFAFFLTLFFIANSLTLQPQSTSTPCNKDPYKQLNLILNQNGTVTRPNKPPDSPPAADPSLLVLSKDLSINQSKGTWARVYLPRAAQDHRSKLPLVVFFHGGGFIFLSAASTIFHEFCFNMANDVDAVVVSVEYRLAPEHRLPAAYDDAVEALQWIKASQDNWLKNLVDYSNVFLMGSSAGGNIAYNAGLRVAAAADDKIPEIKGLILVQPFFSGTHRTGSERRLANEPHLGLCFNDAMWELSLPVGVDRDHKYCNPTAGKGRARLELIKRLGWWVLVTGCGGDPLVDRQVHLVKLMQEKGVKVVGHFTPGDYHGIQDSEPLKAKVLYGVIKTFISALN 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02322 356 Gene3D alpha/beta hydrolase 48 355 IPR029058 -
Viun4g02322 356 PANTHER ARYLACETAMIDE DEACETYLASE 55 332 - -
Viun4g02322 356 Pfam alpha/beta hydrolase fold 113 333 IPR013094 GO:0016787
Viun4g02322 356 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 113 129 IPR002168 GO:0016787
Viun4g02322 356 SUPERFAMILY alpha/beta-Hydrolases 67 339 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02322 Viun-Chr4 38830611 38831939 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02322 57 323 Carbohydrate Esterase AT5G16080 40.288 5.44e-56 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02322 - - gmx:100792597 576.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03348 7 35391990 35393150 Viun4g02322 4 38830611 38831939 PCT