Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02320 ATGTCCAAAGAAACCATTGACCCCTACCACCGCCTCCAAATCCTCCCCAACCCCGACGGCACCTTCACTCGCCTCATCGGCAACGCTGTTCCAAACACCGCACCCTCCTCAGACCCCTCTCTTCCCATTTCAGTTCTCACCAAAGACATCACCATCAACCCACACAACCACACATGGCTGCGCTTATTCCTCCCACGATCACTGCTATCCTCTTCCAACCCTAACAAGCTTCCTCTCATCGTTTTCTTTCACGGAAGCGGATTCGTGCTGCTCAGTGCGGCTTCCTGCGTGTTCCATGATTTCTGCATCCAAATCGCCGATTCCGCTCAGGCCATTGTGGCCTCCGTCGAGTACCGTCTCGCGCCGGAGCACCGACTGCCGGCGGCCTACAACGACGGCGCAGAAGCGCTGCGGAGGATCGCAAACTGCGAAGATGAGTGGTTGCGTCAATACTCGGATTATTCCAAGTGTTATCTTATGGGGAACAGCGCTGGAGCCACTATCGCTTACCACACAGGTTTACGTGCAGTTGAAGAGGTGAATGATCTTGATGGAGTGAAGATCCAAGGGTTGATATTGCGTCAACCATTCTTCGGCGGAGTGCAGAGGACAGAGTCAGAGTTAAGGCTTGCGAATAACCCATTCCTTCCTCTATGTGTTGCGGATTCGATGTGGGAGTTGGCACTGCCAACTGGTGCTGATCGTGACCATGAATATTGCAGTGTAAGAGCTGGAAATGGGGTTCATAAATTTGAGAAGATGAGGGAGCTTGGTTGGAGGGTGTTGGTGAGTGGCAACAATGGTGACCCATTGGTGGATCGTGATAAGGAATTGGTGCAATTGATGGAAGAAAAAGGGGTGAAAGTGGTGAAGGATTTTCAAGAAGAAGGCTTCCATGGAGTTGAACTCTTTGACCCATTGAAAGCAAGCCAGTTCATTGATTTAGTTAAACATTTCATTAACCCAATCTGTGTTTAG 978 0.5051 MSKETIDPYHRLQILPNPDGTFTRLIGNAVPNTAPSSDPSLPISVLTKDITINPHNHTWLRLFLPRSLLSSSNPNKLPLIVFFHGSGFVLLSAASCVFHDFCIQIADSAQAIVASVEYRLAPEHRLPAAYNDGAEALRRIANCEDEWLRQYSDYSKCYLMGNSAGATIAYHTGLRAVEEVNDLDGVKIQGLILRQPFFGGVQRTESELRLANNPFLPLCVADSMWELALPTGADRDHEYCSVRAGNGVHKFEKMRELGWRVLVSGNNGDPLVDRDKELVQLMEEKGVKVVKDFQEEGFHGVELFDPLKASQFIDLVKHFINPICV 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02320 325 Pfam alpha/beta hydrolase fold 80 301 IPR013094 GO:0016787
Viun4g02320 325 PANTHER ARYLACETAMIDE DEACETYLASE 24 301 - -
Viun4g02320 325 Gene3D alpha/beta hydrolase 9 323 IPR029058 -
Viun4g02320 325 SUPERFAMILY alpha/beta-Hydrolases 39 321 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02320 Viun-Chr4 38820300 38821581 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02320 35 299 Carbohydrate Esterase AT1G68620 37.638 1.42e-47 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02320 - - vra:106767967 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g02320 4 38820300 38821581 Viun7g03348 7 35391990 35393150 PCT
Viun7g03347 7 35388343 35389781 Viun4g02320 4 38820300 38821581 PCT