Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02309 ATGGGCAAGGAGGGTTATTTTGCTGGAAGATCATCAAAGAGAGGTGTAGTTGTTGGAGGAGGTGGTGGTGGTGCTGCTGCTGCTGCTGCTGATGCTGAAACACAAGCACCTTCTGGTTGCATGTGTGCTGTTTTTCAGTTCTTTGATTTCCATCCCTTTCACTTTCCCAACATAACCCAACAACAAAACTCTTTCAAACCACCCTCATGCACTTTAGAAGACCATGCCACAGTCTCCAAAGGTGCTGAAGCACCTAGGAACAGCTTGGAATCAGAGGATGCTGATGGGCCTGTTTCATCTCTCTCATCAAAAGAAGAGGATTTTAAAATTCCTAAGAATATTATGCAAATTAAGACAAGTGGAGGCACAAGAACAGGTGGTGGAAATTTGAATGACTTGTCTGCAGAAATCACCAGCTCCCCAGGGACAAAGACACCAACTTTGGTTGCCAGGTTAATGGGTTTGGATCTTCTTCCACACTCACCCTCTTTTTCTTCTCCTTCTTCTTCTTCTTCATGTCTTTCTGCTCCAAACACACATGGCAATGCGCCACATCTACACCACCACCACCTGAGACACAAGCAACATGTCCAAACGAAGCACAGAAACAGCATTGACAGCAGTGAGATTGCAGCCACGAGATCTTTGCCTGAGACACCAAGAATCTCCTCAGCAAGAAGATCAGATGGTGATTATTACCACCACAGACTCTCACTCCAAATCAACAAGGAAAACATGAATCTTGCCGAGGATTTAGAGCTCCCTCGACTCTCGTTTTCCAAAAGAAAGTGTGATGAGAACAATGGCAGAAGTCCAAGCCACTATGCTAGGCAAATAGTCAAACAGGTTAAGGATAGTGTGAGCAGAAAAGTTGGCCAAGACATCACCAACACTCTCAAAACAAGAGAAGAAAATTCAGGCCAACAACACAAAAGCAAAAAATCTTCCAAAACATCACCACTGAAAGCAATTGACGAAACTGAAACTAGTCCACCCAAACCACACTCAAACACATCTTCCTATTCCCCGAGGCTTAGATTCATTGACAAACACAAACCATCGCCACTCACCCCAAAAGACCAAAACATGATGAAACTACCAGCACCTCCTCCTCCTGTTAACACTCAGCTTTCGAGAGTTTTAACAAAAGCAAAGGCTCAAACATTATCGTTGCCGGAGCAGCAAGATTTTCATCAGAACAGCAAATCTGTCCCAAAATGCAAAATGGGTAGCAATGAAAAGTTCAACTCAAGGCTGAAAAGGCCTCCTCAGACATCGGACATAATCAGAAACAAACAAGAAGAATCGTTCGTGATTCGTCCCACATCGCCTACTAGAGCCAGTGACACCAAAACTGCTAAAAGCAAGAAAACTCATCCATTGTCAAGTAATCTCCTCAATAACATCAACACTGTACCAAATCTTCTTCCTGTCAAGACAGACCCTTCTCCTCCAGCAACCAAAATTCCTCCAAAACAGTCACAGGTGTGTGATAGTCAAGAGTCCAAAAGCAGCTCACAGTTATCTAGTTGTTCGCGCCAGAGGTACAAACAAGAAGGAACAACCACACTCGCCACCCGAGAAACATCACAGAACAAACATAACAGTGCCTCCTCCGCCACCATTGGAGCACCGCAACCTCACTCTCACACCCCACAAGAGCTTCACTACATCACAGCAATCCTTGCCCGTACAACTGCCCTAAACGTAGAGGGCACCCCCACAAACCCACCATTACCGTCCCACCAACACCACCACTGGTTCTCCCCAACCCACCCACTTGACCCATCGATCTTCTTCCACCTCGAAGCCGACAAAGATCTTAGCTTTTCCCCGAAAGAACAACTGGGTCAGCACTGGAATCGGAAGTTGGTGTTCGATCTGGTGGACGAGGTTCTGAAGGAGATCCTGCAAGACAGAGGGAAGAACGGGCTTTGGTTTTCGAAGGGTGTGGGCGGTTGTTGGCACGGTGGGAACGTTGTGGAGAGGGTGTGGAAGAGGGTGGGTGAGTTCCCACGTGCGAAGTGTGAGGTGTTGGAGGACATTGATGGATTGATTGAGGGAGAAGACATGCAGAGAGATAAAGATGGTGAAAGGTTGGAGGAAGAAGGAGAAGGGTTGGTGGCAGAGATTGAAGGGAACATATGGGACACGTTAGTGCATGAAACGGTTATGCTCACAGATTGCTTGGGAAATGTGAGAAAAGAGAAGTTATTAGATGATGATGTGAAAATATCACATGTTTGTACTGTCTCTCAATTTTAA 2265 0.4592 MGKEGYFAGRSSKRGVVVGGGGGGAAAAAADAETQAPSGCMCAVFQFFDFHPFHFPNITQQQNSFKPPSCTLEDHATVSKGAEAPRNSLESEDADGPVSSLSSKEEDFKIPKNIMQIKTSGGTRTGGGNLNDLSAEITSSPGTKTPTLVARLMGLDLLPHSPSFSSPSSSSSCLSAPNTHGNAPHLHHHHLRHKQHVQTKHRNSIDSSEIAATRSLPETPRISSARRSDGDYYHHRLSLQINKENMNLAEDLELPRLSFSKRKCDENNGRSPSHYARQIVKQVKDSVSRKVGQDITNTLKTREENSGQQHKSKKSSKTSPLKAIDETETSPPKPHSNTSSYSPRLRFIDKHKPSPLTPKDQNMMKLPAPPPPVNTQLSRVLTKAKAQTLSLPEQQDFHQNSKSVPKCKMGSNEKFNSRLKRPPQTSDIIRNKQEESFVIRPTSPTRASDTKTAKSKKTHPLSSNLLNNINTVPNLLPVKTDPSPPATKIPPKQSQVCDSQESKSSSQLSSCSRQRYKQEGTTTLATRETSQNKHNSASSATIGAPQPHSHTPQELHYITAILARTTALNVEGTPTNPPLPSHQHHHWFSPTHPLDPSIFFHLEADKDLSFSPKEQLGQHWNRKLVFDLVDEVLKEILQDRGKNGLWFSKGVGGCWHGGNVVERVWKRVGEFPRAKCEVLEDIDGLIEGEDMQRDKDGERLEEEGEGLVAEIEGNIWDTLVHETVMLTDCLGNVRKEKLLDDDVKISHVCTVSQF 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02309 754 MobiDBLite consensus disorder prediction 417 449 - -
Viun4g02309 754 MobiDBLite consensus disorder prediction 457 477 - -
Viun4g02309 754 MobiDBLite consensus disorder prediction 161 179 - -
Viun4g02309 754 MobiDBLite consensus disorder prediction 389 551 - -
Viun4g02309 754 MobiDBLite consensus disorder prediction 80 105 - -
Viun4g02309 754 MobiDBLite consensus disorder prediction 204 222 - -
Viun4g02309 754 Pfam Domain of unknown function (DUF4378) 554 722 IPR025486 -
Viun4g02309 754 MobiDBLite consensus disorder prediction 322 344 - -
Viun4g02309 754 MobiDBLite consensus disorder prediction 490 548 - -
Viun4g02309 754 MobiDBLite consensus disorder prediction 161 227 - -
Viun4g02309 754 Pfam DUF761-associated sequence motif 134 161 IPR032795 -
Viun4g02309 754 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 726 - -
Viun4g02309 754 MobiDBLite consensus disorder prediction 389 407 - -
Viun4g02309 754 MobiDBLite consensus disorder prediction 183 199 - -
Viun4g02309 754 MobiDBLite consensus disorder prediction 296 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02309 Viun-Chr4 38712908 38716770 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02309 115 731 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 33.853 3.42e-62 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02309 - - gmx:100795947 979.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g02309 4 38712908 38716770 Viun4g02309 4 38712908 38716770 ECH
Viun4g02309 4 38712908 38716770 Viun7g03339 7 35296749 35300577 PCT