Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02308 ATGGGCAAGGAGGGTTATTTTGCTGGAAGATCATCAAAGAGAGGTGTAGTTGTTGGAGGAGGTGGTGGTGGTGCTGCTGCTGCTGCTGCTGATGCTGAAACACAAGCACCTTCTGGTTGCATGTGTGCTGTTTTTCAGTTCTTTGATTTCCATCCCTTTCACTTTCCCAACATAACCCAACAACAAAACTCTTTCAAACCACCCTCATGCACTTTAGAAGACCATGCCACAGTCTCCAAAGGTGCTGAAGCACCTAGGAACAGCTTGGAATCAGAGGATGCTGATGGGCCTGTTTCATCTCTCTCATCAAAAGAAGAGGATTTTAAAATTCCTAATATTATGCAAATTAAGACAAGTGGAGGCACAAGAACAGGTGGTGGAAATTTGAATGACTTGTCTGCAGAAATCACCAGCTCCCCAGGGACAAAGACACCAACTTTGGTTGCCAGGTTAATGGGTTTGGATCTTCTTCCACACTCACCCTCTTTTTCTTCTCCTTCTTCTTCTTCTTCATGTCTTTCTGCTCCAAACACACATGGCAATGCGCCACATCTACACCACCACCACCTGAGACACAAGCAACATGTCCAAACGAAGCACAGAAACAGCATTGACAGCAGTGAGATTGCAGCCACGAGATCTTTGCCTGAGACACCAAGAATCTCCTCAGCAAGAAGATCAGATGGTGATTATTACCACCACAGACTCTCACTCCAAATCAACAAGGAAAACATGAATCTTGCCGAGGATTTAGAGCTCCCTCGACTCTCGTTTTCCAAAAGAAAGTGTGATGAGAACAATGGCAGAAGTCCAAGCCACTATGCTAGGCAAATAGTCAAACAGGTTAAGGATAGTGTGAGCAGAAAAGTTGGCCAAGACATCACCAACACTCTCAAAACAAGAGAAGAAAATTCAGGCCAACAACACAAAAGCAAAAAATCTTCCAAAACATCACCACTGAAAGCAATTGACGAAACTGAAACTAGTCCACCCAAACCACACTCAAACACATCTTCCTATTCCCCGAGGCTTAGATTCATTGACAAACACAAACCATCGCCACTCACCCCAAAAGACCAAAACATGATGAAACTACCAGCACCTCCTCCTCCTGTTAACACTCAGCTTTCGAGAGTTTTAACAAAAGCAAAGGCTCAAACATTATCGTTGCCGGAGCAGCAAGATTTTCATCAGAACAGCAAATCTGTCCCAAAATGCAAAATGGGTAGCAATGAAAAGTTCAACTCAAGGCTGAAAAGGCCTCCTCAGACATCGGACATAATCAGAAACAAACAAGAAGAATCGTTCGTGATTCGTCCCACATCGCCTACTAGAGCCAGTGACACCAAAACTGCTAAAAGCAAGAAAACTCATCCATTGTCAAGTAATCTCCTCAATAACATCAACACTGTACCAAATCTTCTTCCTGTCAAGACAGACCCTTCTCCTCCAGCAACCAAAATTCCTCCAAAACAGTCACAGGTGTGTGATAGTCAAGAGTCCAAAAGCAGCTCACAGTTATCTAGTTGTTCGCGCCAGAGGTACAAACAAGAAGGAACAACCACACTCGCCACCCGAGAAACATCACAGAACAAACATAACAGTGCCTCCTCCGCCACCATTGGAGCACCGCAACCTCACTCTCACACCCCACAAGAGCTTCACTACATCACAGCAATCCTTGCCCGTACAACTGCCCTAAACGTAGAGGGCACCCCCACAAACCCACCATTACCGTCCCACCAACACCACCACTGGTTCTCCCCAACCCACCCACTTGACCCATCGATCTTCTTCCACCTCGAAGCCGACAAAGATCTTAGCTTTTCCCCGAAAGAACAACTGGGTCAGCACTGGAATCGGAAGTTGGTGTTCGATCTGGTGGACGAGGTTCTGAAGGAGATCCTGCAAGACAGAGGGAAGAACGGGCTTTGGTTTTCGAAGGGTGTGGGCGGTTGTTGGCACGGTGGGAACGTTGTGGAGAGGGTGTGGAAGAGGGTGGGTGAGTTCCCACGTGCGAAGTGTGAGGTGTTGGAGGACATTGATGGATTGATTGAGGGAGAAGACATGCAGAGAGATAAAGATGGTGAAAGGTTGGAGGAAGAAGGAGAAGGGTTGGTGGCAGAGATTGAAGGGAACATATGGGACACGTTAGTGCATGAAACGGTTATGCTCACAGATTGCTTGGGAAATGTGAGAAAAGAGAAGTTATTAGATGATGATGTGAAAATATCACATGTTTGTACTGTCTCTCAATTTTAA 2262 0.4593 MGKEGYFAGRSSKRGVVVGGGGGGAAAAAADAETQAPSGCMCAVFQFFDFHPFHFPNITQQQNSFKPPSCTLEDHATVSKGAEAPRNSLESEDADGPVSSLSSKEEDFKIPNIMQIKTSGGTRTGGGNLNDLSAEITSSPGTKTPTLVARLMGLDLLPHSPSFSSPSSSSSCLSAPNTHGNAPHLHHHHLRHKQHVQTKHRNSIDSSEIAATRSLPETPRISSARRSDGDYYHHRLSLQINKENMNLAEDLELPRLSFSKRKCDENNGRSPSHYARQIVKQVKDSVSRKVGQDITNTLKTREENSGQQHKSKKSSKTSPLKAIDETETSPPKPHSNTSSYSPRLRFIDKHKPSPLTPKDQNMMKLPAPPPPVNTQLSRVLTKAKAQTLSLPEQQDFHQNSKSVPKCKMGSNEKFNSRLKRPPQTSDIIRNKQEESFVIRPTSPTRASDTKTAKSKKTHPLSSNLLNNINTVPNLLPVKTDPSPPATKIPPKQSQVCDSQESKSSSQLSSCSRQRYKQEGTTTLATRETSQNKHNSASSATIGAPQPHSHTPQELHYITAILARTTALNVEGTPTNPPLPSHQHHHWFSPTHPLDPSIFFHLEADKDLSFSPKEQLGQHWNRKLVFDLVDEVLKEILQDRGKNGLWFSKGVGGCWHGGNVVERVWKRVGEFPRAKCEVLEDIDGLIEGEDMQRDKDGERLEEEGEGLVAEIEGNIWDTLVHETVMLTDCLGNVRKEKLLDDDVKISHVCTVSQF 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02308 753 MobiDBLite consensus disorder prediction 388 550 - -
Viun4g02308 753 MobiDBLite consensus disorder prediction 182 198 - -
Viun4g02308 753 MobiDBLite consensus disorder prediction 321 343 - -
Viun4g02308 753 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 725 - -
Viun4g02308 753 Pfam Domain of unknown function (DUF4378) 553 721 IPR025486 -
Viun4g02308 753 Pfam DUF761-associated sequence motif 133 160 IPR032795 -
Viun4g02308 753 MobiDBLite consensus disorder prediction 160 178 - -
Viun4g02308 753 MobiDBLite consensus disorder prediction 80 104 - -
Viun4g02308 753 MobiDBLite consensus disorder prediction 388 406 - -
Viun4g02308 753 MobiDBLite consensus disorder prediction 203 221 - -
Viun4g02308 753 MobiDBLite consensus disorder prediction 295 370 - -
Viun4g02308 753 MobiDBLite consensus disorder prediction 416 448 - -
Viun4g02308 753 MobiDBLite consensus disorder prediction 456 476 - -
Viun4g02308 753 MobiDBLite consensus disorder prediction 489 547 - -
Viun4g02308 753 MobiDBLite consensus disorder prediction 160 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02308 Viun-Chr4 38712908 38716774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02308 114 730 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 33.853 3.47e-62 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02308 - - gmx:100795947 973