Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02307 ATGGCACTTTTGCCATATTCAGAATGCATTGTTCTTTGTGCAACCATTTTTCTCTTCTTCACATTATCATCATCATCAATGTCTCAAGCAGAGCTTGATGCTCATTACTACGATAAAACATGTCCACAAGCAGAGAAGATCATTTCAGACACTGTTCTCAGAGCTTCCAAATTTGACCCAAAAGTCCCAGCTCGGATCTTGAGGATGTTCTTCCATGATTGTTTCATAAGGGGTTGTGATGCATCAATATTGCTGGACTCAACTCCGAAAAACCTGGCTGAGAAAGATGGTCCACCTAATCTCTCTGTTCATTCATTCTATGTTATTGATGAAGCCAAGACCAAGCTTGAGAAAGCTTGTCCACACACTGTTTCCTGTGCTGATATAATCGCCATTGCAGCTAGAGATGTGGTAGCACTGTCTGGAGGGCCATCTTGGAATGTGCTAAAAGGAAGAAAAGATGGAAGGGTGTCGAAGGCATCAGAAACAGTGAACTTGCCTGCTCCAACCTTAAATGTGAATCAACTGATTCAGAGTTTTGCAAAGAGAGGTTTAGGGGTGAAAGATATGGTGACTCTCTCTGGTGGCCACACTCTTGGATTTTCACACTGTTCTTCTTTCCAAGCCAGAGTTCATAACTTCAGTTTGTTGCATGACATTGACCCTAGTTTGAACACTCAGTTTGCACTAGACCTCAAAAGGAAGTGTCCTAAACAAAACACAAACCCCAGTGCTGGACACTTCCTGGACACAACATCATCGGTGTTTGACAATGATTACTACAGACAGTTGCTGGTCGGAAAGGGTTTGTTCTCATCAGATCAATCTCTCGTTGGGGATCAAAGAACTAGGTGGATTGTTGAAGCATTCGCCAAAGATCAGGGCTTGTTCTTCAGAGAGTTTGTGGCTTCAATGTTGAAGCTTGGGAATGTGGGGGTCTCTGAAAATGGGGAAGTGAGACTTAATTGCAAGGTTGTGAATTGA 984 0.4289 MALLPYSECIVLCATIFLFFTLSSSSMSQAELDAHYYDKTCPQAEKIISDTVLRASKFDPKVPARILRMFFHDCFIRGCDASILLDSTPKNLAEKDGPPNLSVHSFYVIDEAKTKLEKACPHTVSCADIIAIAARDVVALSGGPSWNVLKGRKDGRVSKASETVNLPAPTLNVNQLIQSFAKRGLGVKDMVTLSGGHTLGFSHCSSFQARVHNFSLLHDIDPSLNTQFALDLKRKCPKQNTNPSAGHFLDTTSSVFDNDYYRQLLVGKGLFSSDQSLVGDQRTRWIVEAFAKDQGLFFREFVASMLKLGNVGVSENGEVRLNCKVVN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02307 327 Gene3D - 35 327 - -
Viun4g02307 327 ProSiteProfiles Plant heme peroxidase family profile. 31 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun4g02307 327 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g02307 327 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g02307 327 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g02307 327 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g02307 327 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g02307 327 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g02307 327 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g02307 327 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g02307 327 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g02307 327 SUPERFAMILY Heme-dependent peroxidases 32 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Viun4g02307 327 Gene3D Peroxidase, domain 2 167 308 - -
Viun4g02307 327 Pfam Peroxidase 55 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun4g02307 327 FunFam Peroxidase 35 176 - -
Viun4g02307 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Viun4g02307 327 PANTHER PEROXIDASE 25-RELATED 18 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g02307 327 CDD secretory_peroxidase 31 326 IPR033905 GO:0004601|GO:0042744
Viun4g02307 327 FunFam Peroxidase 167 308 - -
Viun4g02307 327 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun4g02307 327 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun4g02307 327 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun4g02307 327 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun4g02307 327 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02307 Viun-Chr4 38689538 38691855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02307 18 327 Peroxidase AT5G51890 70.740 5.45e-168 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02307 K00430 - gmx:100795422 570.081