Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02286 ATGCCCCCCATGACACCTTCGCGGGTGACGGGAGGGTTAACCCAATCATCATCACATTCTGGAGTTTTCTTTCAAAGAGATGGACTGTCACAGAGTGTAGTTAACTCTCACCTAAGCTCATCTTTTGTTAATTCATCCAGCACGGTTTCGGGAGCCGGTCATTCAAACCTGGGTCTGGTTTCTGGGGATATGAATAATGCAGTTCTAAATAGTGTGGCAAACTCAGCACCAAGTGTTGGAGCTAGTTCTTTAGTCACAGATGCAAATTCTGCTCTCTCTGGTGGCCCCCATTTGCAGCGAAGTGCCAGTGTTAACACGGACTCATACTTACGATTACCTGCCTCACCCATGTCATTTACGTCAAATAATATTAGTATTTCGGGCTCATCAGTGATCGATGGTTCCTCTGTAGTACAGCAGAGCTCTCATCAAGATCAGAATGTTCAACAATTGCAGCAGAATCAGCAGCAGATGCAGGGTGCTTCAAGTGCTACATCATTGCCCGCATCTCAAACTGGCCCGTCTTCCCTTCATATGGGTGCACATGTCCCTGGATCTTTCATTCATGATCCAAATAATGTATCTCAGCTGTCAAAAAAACCTAGACCGGATATCAAACAGGAAGATATAATGCAGCAGCAGCAGGTTATACAACAGATTCTTCAGAGACAAGATTCCATGCAATTGCAGGGTCGTAATCCACAGTTACAGGCTTTACTTCAACAACAGCAGAGACTGAGACAACAACAACTCTTCCAGTCAATGCCACAGTTACAGCGAGTGCAGTTGCAACAACAGCAACAACAGCAGCAGCAACAACAACAAATGCAATTAAGGCAGCAGTTACAGCAACAAGTGATGCAGCCCTCTTCTGCTGTCAAGCGCCCATACGATAGTAGTGTTAGTGGGGTTTGTGCTCGTCGATTGATGCAATATCTCTATCATCAAAGGCAACGGCCAAATGATAATAGTATTGCGTATTGGAGAAAATTTGTGGCTGAATACTACTCTCTTCGCGCAAAGAAACGGTGGTGCTTGTCGTTATATAACAATGTTGGGCATCATGCACTTGGTGTTTTCCCGCCTGCAGCAATGGATGCGTGGCAGTGTGACATTTGTGGTTCTAAATCTGGAAGGGGATTTGAGGCGACTTATGAAGTATTACCTAGACTTAATGAAATCAAATTTGGCAGTGGAGTTATTGATGAACTTTTGTTTCTGGACTTGCCACGTGAAATAAGATTTCCTTCTGGTGCAATGATGTTAGAATATGCAAAAGCAGTCCAAGAGAGTGTATATGAGCAGCTTCGTGTTGTTCGTGAAGGCCAACTTCGCATCATATTTACTCAAGACTTGAAGATATTGTCTTGGGAGTTCTGTGCAAGGCGGCATGAAGAACTTATTCCTCGAAGGTTGGTTGCACCACAGGTCAACCAATTAGTTCAGGTAGCTCAAAAATGCCAGAGTACAATTGCTGAAAGTGGGGCTGATGGGGTTTCTCAGCAAGATTTGCAAACAAACAGCAACATGGTATTGACAGCAGGGCGCCAGCTTGCAAAAATTTTGGAGTTGCAATCACTTAATGACTTGGGTTTTTCTAAAAGATATGTGAGATGTTTGCAGATATCGGAGGTTGTCAACAGCATGAAAGACCTAATTGATATTTGTGAAGAGCACAAAATTGGGGCAATTGAGAGTTTAAAAAATTATCCTCGACTAGCAACAGCCTCAAAGCTCCAGATGCAAAAGATGCAGGAAATGGAACAGATGGCAAGTGTTCATGGTCTGCCTACTGATAGAAACACACTCAATAAGCTGATGGCAATGAATCCTGGAATGAACAGCCACATAAACAGCACTCATAATATGGTTAATCGTGGTGCTTTGAGTGGGTCAGCCCATTTAGCTCTTACCAACTACCAAAATCTTCTCATGAGGCAAAATTCAATGAATTCTAGCCCTGGCTCCAATCCTGGATCATCATTCAATAATTCTAACCCGAGTCCCTCTTCTGCTTTGCAAGGAGCTGGTCCTTCTTTAATTCCAGGCTCAATGCAAAACTCTGTAGGTGGTTTTCCAGGTCCCCATCTACCCCCACAGCAGCAGCAGCAGCAGCAGCAACTCCTTCAACAGCGTACATTAAGTGGAAATGGTTTACTGCAACAAAGTCATTCACAGGGGTCCCAAGGAAATCAAGCCCTACAGCAGCAGCAGATGATCCAGCAACTGGTGCAGGAAATGTCAAATAACAATGGGGGAATGCAATCACAGTCTCTAGGTGGACCCAATGCAAATGGGAATCTGGGAAAAAATGCACTGGGTTTTGGAGGCCATGCCCCATCCGTAAGTGGAGGTTCTGTCAATGTTCCAGGAAACAATGGACCCATTTCAAGGAATAATAGCTTCAAAACAGCTTCAAACAGTGATTCTTCTGCAGCTGGTGGCAACAATGGATTCAACCCAAGAACATCTGATATGCCACAAAGTCTACATTTGCAAGGTATGGTTCAGGATATTGGCCATGAGTTCGCGGATAGCTCCTTCTTTAACAGTGATCTTGATGATAACATGGGTTTTGGCTGGAAGGCATGA 2592 0.4417 MPPMTPSRVTGGLTQSSSHSGVFFQRDGLSQSVVNSHLSSSFVNSSSTVSGAGHSNLGLVSGDMNNAVLNSVANSAPSVGASSLVTDANSALSGGPHLQRSASVNTDSYLRLPASPMSFTSNNISISGSSVIDGSSVVQQSSHQDQNVQQLQQNQQQMQGASSATSLPASQTGPSSLHMGAHVPGSFIHDPNNVSQLSKKPRPDIKQEDIMQQQQVIQQILQRQDSMQLQGRNPQLQALLQQQQRLRQQQLFQSMPQLQRVQLQQQQQQQQQQQQMQLRQQLQQQVMQPSSAVKRPYDSSVSGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSLRAKKRWCLSLYNNVGHHALGVFPPAAMDAWQCDICGSKSGRGFEATYEVLPRLNEIKFGSGVIDELLFLDLPREIRFPSGAMMLEYAKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELIPRRLVAPQVNQLVQVAQKCQSTIAESGADGVSQQDLQTNSNMVLTAGRQLAKILELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDICEEHKIGAIESLKNYPRLATASKLQMQKMQEMEQMASVHGLPTDRNTLNKLMAMNPGMNSHINSTHNMVNRGALSGSAHLALTNYQNLLMRQNSMNSSPGSNPGSSFNNSNPSPSSALQGAGPSLIPGSMQNSVGGFPGPHLPPQQQQQQQQLLQQRTLSGNGLLQQSHSQGSQGNQALQQQQMIQQLVQEMSNNNGGMQSQSLGGPNANGNLGKNALGFGGHAPSVSGGSVNVPGNNGPISRNNSFKTASNSDSSAAGGNNGFNPRTSDMPQSLHLQGMVQDIGHEFADSSFFNSDLDDNMGFGWKA 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02286 863 MobiDBLite consensus disorder prediction 785 827 - -
Viun4g02286 863 MobiDBLite consensus disorder prediction 135 211 - -
Viun4g02286 863 MobiDBLite consensus disorder prediction 647 686 - -
Viun4g02286 863 MobiDBLite consensus disorder prediction 749 765 - -
Viun4g02286 863 MobiDBLite consensus disorder prediction 784 827 - -
Viun4g02286 863 PANTHER LIM DOMAIN-BINDING PROTEIN 61 846 IPR029005 -
Viun4g02286 863 Coils Coil 261 285 - -
Viun4g02286 863 MobiDBLite consensus disorder prediction 135 177 - -
Viun4g02286 863 MobiDBLite consensus disorder prediction 647 709 - -
Viun4g02286 863 Pfam LIM-domain binding protein 308 568 IPR029005 -
Viun4g02286 863 MobiDBLite consensus disorder prediction 749 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02286 Viun-Chr4 38346701 38353653 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02286 303 572 C2H2 Transcription Factor Family AT1G43850 60.741 2.59e-107 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02286 - - gmx:100816886 1219.53