Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02239 ATGTCCACTTCTCTGCATGAAAACTCTTCAATCTGGTTTTTCCTCCCAATCGCTACCTTAATCATCCTCTTTTTACGTACTGTCATCAATCTTTTAGCCAAATGTAATCATAATTTCAGTTCTTCAATGGCCAGAAAAACCTCACCACCATCTCCTCCAAAGCTTCCAATAATAGGAAATCTCCACCAACTTGGCACTCTCACTCACCGCACTCTCCATTCCTTTGCTCAAACCTATGGCCCTTTGATGTTACTTCACTTTGGGAAGGTGCCAGTTCTTGTGGTCTCAACGGCTGAGGCAGCTCGTGAGGTTATGAAAACCCATGACCTTGTTTTCTCCAATAGACCACATCGTAAGATGTTTGATGTCTTCTTGTACGATTCCAAAGACATGGCATCTGCTCCATACGGCAAATACTGGAGGCAGATAAGGAGCATTTGTGTGTTGCATCTTCTCAGTGCAAAAAAGGTTCAATCCTTCGGTGCAGTGAGGGAAGAGGAGATCTCCATAATGATGGAGAAGGTTAAGCAGTGTTGTTGTTCTGAGATGCCTGTGAATTTAACTGAATTATTTTGTACAGTCACAAATGACATAGTGTGTAGAGCTGCTCTCGGAAGGAGATACAGTGGAAGAGAAGGGAGGAAGTTCTGGGGGCCAATGAATGAGATGACGAAGCTGTTGGGTGCTCCGTTTATAGGGGATTATATAACTTGGCTTGATTGGGTGGGAAGAGTTAATGGAATGTATGGTAGGGCAAAGAAAGCGGCTAAACAGCTTGATGAATTTTTTGATGAAGTTGTTGATGAGCATGTAAATAGGAGAGGGCATGATGTGCATGGTGATGATGATGATGATGAAGAACAGAATGATTTGGTGGACATTTTGCTGAGGATCCAAAAGACAAACTCCATGGGGTTCCAGATTGATAAAACAATCATAAAGGCTATAATCCTGGACATGTTTGTCGCAGGCACTGAAACTAGCTCAACAATCCTAGGATGGATAATGACAGAACTCTTAAGGAACCCAAGTGTGATGCAGAAGCTAAAAGATGAAATAAGGGATGTGGTTGGTGGTAGAAGTCACATAACTGAAGAAGATATAGGTAGCATGCATTATTTGAAAGCAGTGATTAAAGAAAGTTTTCGATTACATACCCCAGTTCCCTTGTTGCTTCCAAGGGAATCCATGGAAGATGCGAAAGTGATGAACTATGAGATTGCAGCAGGAACACAGATAATAGTTAATGCTTGGGCAATTGCAAGAGATCCTTGTCATTGGGAGAAAGCTGAAGAGTTTGAAGCAGAGAGATTCTTAAAGAGTTCAATAGATGTGAAAAGACATGATTTTGAAGTGATACCATTTGGAGCAGGAAGAAGGGGTTGTCCAGGAATAATGTTTGCCATGAATGTGATTGAGTTGGTGATAGCAAACCTTGTTCATCAATTTAATTGGGAAGTGCCTAGTGGAGTAGTGGGGGATCAGACATTGGACATTACTGAATCTGCTGGGTTGACCAGTCAGAGAAAATTCCCTCTCATAGCAATTGCATCCTACCATGCATAA 1566 0.4183 MSTSLHENSSIWFFLPIATLIILFLRTVINLLAKCNHNFSSSMARKTSPPSPPKLPIIGNLHQLGTLTHRTLHSFAQTYGPLMLLHFGKVPVLVVSTAEAAREVMKTHDLVFSNRPHRKMFDVFLYDSKDMASAPYGKYWRQIRSICVLHLLSAKKVQSFGAVREEEISIMMEKVKQCCCSEMPVNLTELFCTVTNDIVCRAALGRRYSGREGRKFWGPMNEMTKLLGAPFIGDYITWLDWVGRVNGMYGRAKKAAKQLDEFFDEVVDEHVNRRGHDVHGDDDDDEEQNDLVDILLRIQKTNSMGFQIDKTIIKAIILDMFVAGTETSSTILGWIMTELLRNPSVMQKLKDEIRDVVGGRSHITEEDIGSMHYLKAVIKESFRLHTPVPLLLPRESMEDAKVMNYEIAAGTQIIVNAWAIARDPCHWEKAEEFEAERFLKSSIDVKRHDFEVIPFGAGRRGCPGIMFAMNVIELVIANLVHQFNWEVPSGVVGDQTLDITESAGLTSQRKFPLIAIASYHA 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02239 521 SUPERFAMILY Cytochrome P450 49 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02239 521 FunFam Cytochrome P450 83B1 36 516 - -
Viun4g02239 521 Pfam Cytochrome P450 49 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02239 521 Gene3D Cytochrome P450 36 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02239 521 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02239 521 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02239 521 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02239 521 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02239 521 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02239 521 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02239 521 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02239 521 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02239 521 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02239 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Viun4g02239 521 PANTHER CYTOCHROME P450 71B11-RELATED 29 518 - -
Viun4g02239 521 CDD CYP71-like 78 513 - -
Viun4g02239 521 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02239 521 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g02239 521 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02239 Viun-Chr4 38077665 38079376 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02239 45 518 Cytochrome P450 AT3G48310 50.105 1.95e-175 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02239 - - gmx:100806940 766.148