Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Viun4g02234 | ATGTCCACTTCTCTGCATGAAAACTCTTCAATCTGGTTTTTCCTCCCAATCGCTACCTTAATCATCCTCTTTTTACGTACTGTCATCAATCTTTTAGCCAAATGTAATCATAATTTCAGTTCTTCAATGGCCAGAAAAACATCACCACCATCTCCTCCAAAGCTTCCAATAATAGGAAATCTCCACCAACTTGGCACTCTCACTCACCGCACTCTCCATTCCTTTGCTCAAACCTATGGTCCTTTGATGTTACTTCACTTTGGAAAGGTGCCAGTTCTTGTGGTCTCAACGGCTGAGGCAGCTCGTGAGGTTATGAAAACCCATGACCTTGTTTTCTCCAATAGACCACATCGTAAGATGTTTGATATCTTCTTGTACGATTCCAAAGACGTGGCATCTGCTCCATACGGCAACTACTGGAGGCAGATAAGGAGTATATGTGTGTTGCATCTTCTGAGTGCAAAAAAGGTTCAATCCTTCGGTGCAGTGAGAGAAGAGGAGATCTCCATAATGATGGATAAGGTTAAGCAGTGTTGTTCTTCTGAGATGCCTGTGAATTTAACTGAATTATTTTGTACAGTCACAAATGACATAGTGTGTAGAGCTGCTCTCGGGAGGAGATACAGTGGAAGAGAAGGGAGGAAGTTCTGGGGGCCAATGAATGAGATGATGAAGCTGTTGGGTGCTCCGTTTATAGGAGATTATATAACTTGGCTTGATTGGGTGGGAAGAGTTAATGGAATGTATGGTAGGGCAAAGAGATTGGCTAAACAGCTTGATGAATTTTTTGATCAAGTTGTTGATGAACATGTCAATAGAAGAGGGCATGATGTGCATGGTGATGATGATGATGAAGAACAGAATGATTTGGTGGACATTTTGCTGAGGATCCAAAAGACAAACGCATTGGGGTTCCAGATTGATAAAACAATCATAAAGGCTATAATCCTGGACATGTTTGTGGCAGGCACTGAAACTAGCTCCACAATCCTAGGATGGATAATGACAGAACTCTTAAGGAACCCAAGTGTGATGCAGAAGCTAAAAGATGAAATAAGGGATGTGGTTGGTGGTAGAAGTCACATAACTGAAGAAGATTTAGGTAGCATGCATTATTTGAAAGCAGTGATTAAAGAAAGTTTTCGATTACATACCCCAGTTCCCTTGTTGCTTCCAAGGGAATCCATGGAAGATGCGAAAGTGATGAACTATGAGATTGCAGGAGGCACACAGATAATAGTTAATGCTTGGGCAATTGCAAGAGATCCTTGTCATTGGGAGAAAGCTGAGGAGTTTGAAGCAGAGAGATTCTTAAAGAGTTCAATAGATGTGAAAGGACATGATTTTGAAGTGATACCATTTGGAGCAGGAAGAAGGGGTTGTCCAGGAATAATGTTTGCCATGAATGTGATTGAGTTGGTGATAGCAAACCTTGTTCATCAATTTAATTGGGAAGTGCCTAGTGGAGCAGTGGGGGATCAGACACTGGACATTACTGAATCTGCTGGGTTGACCAGTCAGAGAAAATTCCCTCTCATAGCAATTGCATCCCACCATGCATAA | 1563 | 0.4178 | MSTSLHENSSIWFFLPIATLIILFLRTVINLLAKCNHNFSSSMARKTSPPSPPKLPIIGNLHQLGTLTHRTLHSFAQTYGPLMLLHFGKVPVLVVSTAEAAREVMKTHDLVFSNRPHRKMFDIFLYDSKDVASAPYGNYWRQIRSICVLHLLSAKKVQSFGAVREEEISIMMDKVKQCCSSEMPVNLTELFCTVTNDIVCRAALGRRYSGREGRKFWGPMNEMMKLLGAPFIGDYITWLDWVGRVNGMYGRAKRLAKQLDEFFDQVVDEHVNRRGHDVHGDDDDEEQNDLVDILLRIQKTNALGFQIDKTIIKAIILDMFVAGTETSSTILGWIMTELLRNPSVMQKLKDEIRDVVGGRSHITEEDLGSMHYLKAVIKESFRLHTPVPLLLPRESMEDAKVMNYEIAGGTQIIVNAWAIARDPCHWEKAEEFEAERFLKSSIDVKGHDFEVIPFGAGRRGCPGIMFAMNVIELVIANLVHQFNWEVPSGAVGDQTLDITESAGLTSQRKFPLIAIASHHA | 520 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Viun4g02234 | 520 | Gene3D | Cytochrome P450 | 36 | 514 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Viun4g02234 | 520 | PANTHER | CYTOCHROME P450 71B11-RELATED | 29 | 517 | - | - | |
| Viun4g02234 | 520 | Pfam | Cytochrome P450 | 49 | 489 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Viun4g02234 | 520 | SUPERFAMILY | Cytochrome P450 | 49 | 515 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Viun4g02234 | 520 | CDD | CYP71-like | 78 | 512 | - | - | |
| Viun4g02234 | 520 | PRINTS | P450 superfamily signature | 452 | 461 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Viun4g02234 | 520 | PRINTS | P450 superfamily signature | 375 | 386 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Viun4g02234 | 520 | PRINTS | P450 superfamily signature | 322 | 339 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Viun4g02234 | 520 | PRINTS | E-class P450 group I signature | 100 | 121 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Viun4g02234 | 520 | PRINTS | E-class P450 group I signature | 374 | 392 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Viun4g02234 | 520 | PRINTS | E-class P450 group I signature | 311 | 328 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Viun4g02234 | 520 | PRINTS | E-class P450 group I signature | 451 | 461 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Viun4g02234 | 520 | PRINTS | E-class P450 group I signature | 461 | 484 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Viun4g02234 | 520 | PRINTS | E-class P450 group I signature | 76 | 95 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Viun4g02234 | 520 | PRINTS | E-class P450 group I signature | 194 | 212 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Viun4g02234 | 520 | PRINTS | E-class P450 group I signature | 331 | 357 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Viun4g02234 | 520 | PRINTS | E-class P450 group I signature | 415 | 439 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Viun4g02234 | 520 | FunFam | Cytochrome P450 83B1 | 36 | 515 | - | - | |
| Viun4g02234 | 520 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 454 | 463 | IPR017972 | GO:0005506|GO:0016705 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Viun4g02234 | Viun-Chr4 | 38055117 | 38057077 | Dispersed/Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Viun4g02234 | 45 | 518 | Cytochrome P450 | AT3G48270 | 49.474 | 6.01e-175 | 500 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Viun4g02234 | - | - | gmx:100806940 | 776.548 |