Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02211 ATGGGAAACCAATCTTACATTGAACTCTCAAATTCTGACAAAAAAAGAGAAAGAGGAAAAATGGAAAAGCAGACACTGGAAAAAGCAAAACCAAAATACAGAAAAGGGTTATGGTCACCTGAAGAAGATAATAAACTCAGAAACCATATCCTTAAGCATGGTCATGGATGCTGGAGCTCTGTCCCCATTAAGGCAGGCTTGCAAAGAAATGGAAAAAGTTGCCGACTAAGATGGATTAACTACCTGAGACCTGGATTGAAGAGAGGGGTTTTCAGCAAACATGAAGAAGATACAATCATGGCTCTTCACCACATGTTAGGGAACAAGTGGTCTCAAATAGCACAGCATTTACCAGGAAGAACTGATAATGAGATAAAGAATTACTGGCATTCATATCTGAAGAAGAAAGTGATGAAAACTAAGGAAATGGAATCTGAGAAACAAATTCAGCATGCTTCTTCAAGTTCAGACACAGTGGAAAATTCACTCTCTCCACAGAAACTTGCAACTCAAGATCCAAGTTATGCATTGCTACAAAACATGGAAAAACCAGCAACACACTCTGATAACTTTTTCTCACAAAGCTATGATTTTTCCAAAGAGGCTTGTCAGAGTTCACTGCCAAAACTCTTATTTTCTGAGTGGCTTTCAGAGGATCAAGTAAATGGTGCAGGCTCAGTGAATTCTGATGATTCTTTGGTATTGGGAAATATGTTTGATCAAAACTCATCTTTCCAAGAAGCTATAATGCAGTTGTTGGAAGGGAACTTTGGTGAAGAGTATCATAATAGTTTAATTCACAGTTCAACCAGTGAGGTGTACAATTCACAGCTTAAGCCATCAAATCAAGTGGATGGAAGTGATTTCATTCACTGCATTCCTGGGAATGATTTATGCAGCAATTTCAGCTTAATCAATCGGGCTATGTGA 930 0.3828 MGNQSYIELSNSDKKRERGKMEKQTLEKAKPKYRKGLWSPEEDNKLRNHILKHGHGCWSSVPIKAGLQRNGKSCRLRWINYLRPGLKRGVFSKHEEDTIMALHHMLGNKWSQIAQHLPGRTDNEIKNYWHSYLKKKVMKTKEMESEKQIQHASSSSDTVENSLSPQKLATQDPSYALLQNMEKPATHSDNFFSQSYDFSKEACQSSLPKLLFSEWLSEDQVNGAGSVNSDDSLVLGNMFDQNSSFQEAIMQLLEGNFGEEYHNSLIHSSTSEVYNSQLKPSNQVDGSDFIHCIPGNDLCSNFSLINRAM 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02211 309 Gene3D - 90 162 - -
Viun4g02211 309 FunFam MYB transcription factor 90 161 - -
Viun4g02211 309 CDD SANT 38 82 IPR001005 -
Viun4g02211 309 PANTHER MYB DOMAIN PROTEIN 55 28 259 - -
Viun4g02211 309 Gene3D - 35 87 - -
Viun4g02211 309 ProSiteProfiles Myb-like domain profile. 83 133 IPR001005 -
Viun4g02211 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 82 IPR017930 -
Viun4g02211 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 137 IPR017930 -
Viun4g02211 309 ProSiteProfiles Myb-like domain profile. 30 82 IPR001005 -
Viun4g02211 309 MobiDBLite consensus disorder prediction 149 166 - -
Viun4g02211 309 MobiDBLite consensus disorder prediction 143 166 - -
Viun4g02211 309 SUPERFAMILY Homeodomain-like 33 129 IPR009057 -
Viun4g02211 309 MobiDBLite consensus disorder prediction 10 30 - -
Viun4g02211 309 SMART sant 87 135 IPR001005 -
Viun4g02211 309 SMART sant 34 84 IPR001005 -
Viun4g02211 309 CDD SANT 91 133 IPR001005 -
Viun4g02211 309 FunFam MYB transcription factor 32 88 - -
Viun4g02211 309 Pfam Myb-like DNA-binding domain 88 133 IPR001005 -
Viun4g02211 309 Pfam Myb-like DNA-binding domain 35 82 IPR001005 -
Viun4g02211 309 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02211 Viun-Chr4 37823046 37826130 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02211 28 216 MYB Transcription Factor Family AT3G48920 53.968 1.95e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Viun4g02211 Myb_DNA-binding 9.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02211 K09422 - gmx:100803537 531.176