Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02152 ATGGTTTCAAAGCAAATCGATCGCGTGGGTGGTAAGGTTCGGGTCGTGGCCAGGATCCGCGGGTTTTCGGGTCCTGAGGCTAATTCGGAGTCTGGCACTGCAAGGACTGTGGAATGGATTTCGGTGAATGGCGAAAATTCTGATGATGTGTCCATCTCCTTCAGAGACCATCCTAGTCGTTATTTGGTGGACTATTGCTATAAGGAAGATGAAGACAGTGAAATGATATATTCAAGGGAGGTAAAGCCTTTTGTGTCTGCAGCTTTTGAAGGTCATAACAGCACTGTTATTGCACATGGAGCTAGGGGTAGTGGAAAGACCCACATAATTCAGGGCTCTGTTGAGAGTCCGGGTTTGGCAGTGCTTGCTGTTGCTGAGTTTCTTTCAATTGCTGAGAAAAATGGGAAATCCATAAATGTTTCTCTCTATGAGATTGATCATCAGGAACGGGCCATGGATTTATTAAATCCAGAAAACCCGCCAATCTCTGTTTTTGAAGATCGTGGTAGAATTCAGTTTAAAGGATTGACTCAGGTTCCTGTGAGATCAGTTAGTGAATTTCAGAATTTGTACTCCACTGCATGTTTTAGCTTTAAGGGAGCTCCCAAAAAAGGTGTTCATAGAAGTCATATGGGATTGATTGTGCATGTCGTTTCCCAGAATGTAGGAAGTATTGTCAGCAAAATGAATTTTGTTGACTTGGCAGGGTATGAAGATACTAGAAAGAAAACTAGTGATGGCTCCTGCCTAACTGAGATTAGCAAAATTAACAAGTCAATATATGCATTATTGAATATTTGCCATGCTTTGAGTACAAATGAAAGTCATATTCCCTACCGGGAAAGCAAGCTTACACGCATACTGCAGGATTCTTTGAGGGGAACTAGCAGAATTTTACTGGTTTCATGCTTGAACCCATCATTTTGCCAAGACACTATTTACATGCTAAGCTTGGCATCACGGTCATGTCATCGGATTCATCATCAGACATTCTTAGATTCCACCAAGAAAAGTGTAAGTTCAGCAAATATGAGACAGATACCTAAAAGCGTTTCTGGGACAGCAAAGAAATTACACGGTTCTTCTAAACCAATGAAAGGAAGGAAATTGTTTGATGAAGCTAGTCATTCCACACCTAAGGTTAAGAAGGAAATGGTGACTGAAGCATCAAAGCCTTTGATGGATAACTCATTACCTGAGACTGGAAATCATGACAACTCTGGAGTGGAAACGATAGTGAATAATTTAGCATTGACAAATGTTTCATTTACGGAGGATGACTTTGCAAAAGCTAGTCAGGACATGAAACTTGATCCGACGTTAGAAAATGGTGATTCGTCCTTGAACGCCAGCAGTGAAGTGGAATTCAGTTCCCTAGCAGCTAAGGATATTTTAGTGGATGGAGATGACGGTAAAAAGGAGCATACCCCTTGTATCAATCATTCCTCTGAACCATTGTCAATAATAGTTCACGAAGGTCATAATTCACCACCCATTAGTTCACAGTTGCGCGATCTTTCCAATAGTCTTAAAATGCTATGCTCTTCAACTTCATCATGCTTGCAAAATTCAGAAAAACAACCCATTTCAGTTCTAGAACCAAAAACTCCTATAAATAAACAAAACATGAACATTAACCAATGGAATGAAATGAATGGAAAAAGTCCTTGGGAGACATTCAGCATGCGAGGCTCTGGGATGAAGAGTTCCATCGTTCAAGAATATCTTAGATTTTTGAACACTGCTGACAAGGAAGAATTAAAAAGATTAAAGGGAATTGGAGACAAGAGGGCTAACTTTATACTTGAACTCAGACAAGAATCTCCAGAACCTTTCAAAAGTCTAAACGATTTAAAGGACATTGGGCTTTCTGCAAAGCAGATTAAGGGAATGATGAAGAAGGAAGTTGGAGAGCTTTTCAGTGAATTATAA 1932 0.4011 MVSKQIDRVGGKVRVVARIRGFSGPEANSESGTARTVEWISVNGENSDDVSISFRDHPSRYLVDYCYKEDEDSEMIYSREVKPFVSAAFEGHNSTVIAHGARGSGKTHIIQGSVESPGLAVLAVAEFLSIAEKNGKSINVSLYEIDHQERAMDLLNPENPPISVFEDRGRIQFKGLTQVPVRSVSEFQNLYSTACFSFKGAPKKGVHRSHMGLIVHVVSQNVGSIVSKMNFVDLAGYEDTRKKTSDGSCLTEISKINKSIYALLNICHALSTNESHIPYRESKLTRILQDSLRGTSRILLVSCLNPSFCQDTIYMLSLASRSCHRIHHQTFLDSTKKSVSSANMRQIPKSVSGTAKKLHGSSKPMKGRKLFDEASHSTPKVKKEMVTEASKPLMDNSLPETGNHDNSGVETIVNNLALTNVSFTEDDFAKASQDMKLDPTLENGDSSLNASSEVEFSSLAAKDILVDGDDGKKEHTPCINHSSEPLSIIVHEGHNSPPISSQLRDLSNSLKMLCSSTSSCLQNSEKQPISVLEPKTPINKQNMNINQWNEMNGKSPWETFSMRGSGMKSSIVQEYLRFLNTADKEELKRLKGIGDKRANFILELRQESPEPFKSLNDLKDIGLSAKQIKGMMKKEVGELFSEL 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02152 643 Gene3D - 567 639 - -
Viun4g02152 643 Gene3D Kinesin motor domain 1 325 IPR036961 -
Viun4g02152 643 MobiDBLite consensus disorder prediction 365 382 - -
Viun4g02152 643 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 322 IPR027417 -
Viun4g02152 643 PANTHER KINESIN-RELATED 15 451 IPR027640 GO:0003777|GO:0007018
Viun4g02152 643 SMART kinesin_4 10 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun4g02152 643 Pfam Kinesin motor domain 18 321 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun4g02152 643 PRINTS Kinesin heavy chain signature 228 246 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun4g02152 643 PRINTS Kinesin heavy chain signature 91 112 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun4g02152 643 PRINTS Kinesin heavy chain signature 277 298 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun4g02152 643 MobiDBLite consensus disorder prediction 349 382 - -
Viun4g02152 643 FunFam Kinesin-like protein KIN-10C 565 639 - -
Viun4g02152 643 Pfam Helix-hairpin-helix motif 579 626 - -
Viun4g02152 643 SUPERFAMILY RuvA domain 2-like 572 634 IPR010994 -
Viun4g02152 643 ProSiteProfiles Kinesin motor domain profile. 12 325 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02152 Viun-Chr4 36983913 36989260 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02152 6 352 Calmodulin-binding Proteins AT5G65930 29.319 1.43e-31 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02152 K10403 - gmx:100809612 875.93