Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02118 ATGGCAGGTGAGGTGGTGAAGAAGGAGGAGTCTCTGAACCTGAAAATCACCAACAAGAGCCATGTGCAACCTGAGGAGAAGATTGGGAGAAAAGAGTACCAATTGGTGACTTTTGATCTTCCCTACCTGGCCTTCTACTACAACCAGAAGCTTCTCTTCTACAAAGGAGAAGACTTTGATGGCATGGTGCAGAAGCTCAAGCTTGGCCTTGGTGTGGTTCTCAAAGAGTTCCACCAACTGGCTGGAAAGTTAGGGAAAGATGAAGAGGGTGTGTTCAGGGTTGAGTATGATGATGACATGCTTGGTGTTGAGGTTGTTGAAGCTGTTGCTGATGAGATCGCTGTGGATCAACTAACTGTGGCTGAAAGTTCCAGCAATCTCAAAGAACTCATACCTTACACAGGTATCCTGAACTTGGAAGGCATGCATCGACCCTTGCTAGCAGTTCAGTTAACGAAGCTGAAAGATGGGCTTGCAATGGGCCTAGCATTTAACCACGCTGTGTTGGATGGGACTGCCACGTGGCAATTCATGACATCCTGGGCCGAGATTTGCAACGGGTCACCTTCCACGTCAGCACCACCGTTCCTGGACCGGACCAAGGCCCGGAACACGAAAGTGAAGCTGGACCTCTCCCTGCCGGAGCCCAACGGCCATCCAACTTCCAACGGCGATGCAAAGCCCACTCCAACTCTCAGGGAAAGGATATTCAAATTCTCCGAGTCAAAGATCGACAAGATCAAGTCAACGGTCAACGAGAACCCTCCATCGGACGGCTCAAAACCGTTCTCAACATTTCAGGCTCTTTCCTCCCATATCTGGCGCCATGTAAGCCATGCACGTAACCTGAAGCCGGAGGACTACACCGTGTTCACTGTTTTTGCGGACTGCCGGAAGCGGGTCGACCCGCCAATGCCGGATAATTATTTCGGAAACCTAATTCAGGCTATATTCACCGTTACGGCGGCTGGACTTTTATCGGCCCATCCGCCGCAATTCGGTGCTTCACTGGTTCAAAAGGCCATTGAAGACCACAACGCGAAAGCGATCGATGGTCGTAACAAGGAGTGGGAGAGTGCACCCAAAATTTTCCAATTCAAAGATGCTGGGGTGAATTGTGTGGCTGTTGGAAGCTCACCTAGGTTTAAGGTTTATGACATTGATTTTGGGTGGGGTAAGGCAGAAAATGTGAGGAGTGGAACTAATAACAAGTTTGATGGGATGATTTATTTGTATCCGGGGAAGAATGGAGGAAGGAGCATTGATGTGGAACTAACCTTGGAGCCTGAGGCTATGGCGAGGTTGGAGAAAGATAAGGGTTTTCTTTTGGAAGCATAA 1338 0.4925 MAGEVVKKEESLNLKITNKSHVQPEEKIGRKEYQLVTFDLPYLAFYYNQKLLFYKGEDFDGMVQKLKLGLGVVLKEFHQLAGKLGKDEEGVFRVEYDDDMLGVEVVEAVADEIAVDQLTVAESSSNLKELIPYTGILNLEGMHRPLLAVQLTKLKDGLAMGLAFNHAVLDGTATWQFMTSWAEICNGSPSTSAPPFLDRTKARNTKVKLDLSLPEPNGHPTSNGDAKPTPTLRERIFKFSESKIDKIKSTVNENPPSDGSKPFSTFQALSSHIWRHVSHARNLKPEDYTVFTVFADCRKRVDPPMPDNYFGNLIQAIFTVTAAGLLSAHPPQFGASLVQKAIEDHNAKAIDGRNKEWESAPKIFQFKDAGVNCVAVGSSPRFKVYDIDFGWGKAENVRSGTNNKFDGMIYLYPGKNGGRSIDVELTLEPEAMARLEKDKGFLLEA 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02118 445 Gene3D - 214 438 IPR023213 -
Viun4g02118 445 FunFam Tryptamine hydroxycinnamoyl transferase 219 439 - -
Viun4g02118 445 Gene3D - 11 211 IPR023213 -
Viun4g02118 445 Pfam Transferase family 14 439 - -
Viun4g02118 445 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 16 441 - -
Viun4g02118 445 MobiDBLite consensus disorder prediction 211 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02118 Viun-Chr4 36719956 36723251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02118 64 444 Monolignol Biosynthesis Gene Families AT5G48930 26.303 3.59e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02118 K19747 - gmx:100790669 815.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g02118 4 36719956 36723251 Viun4g02118 4 36719956 36723251 ECH