Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02083 ATGGCGGTAGGACTCTCCGCCGCCATAACCTTGAAGCCCTTCCTCCGCCACCACCACCCTCACTTTCCCAAAGCAATCCCAGCCACACTCCCTTTCTCTCCCTTGAGAATTTCCCACCACACAACCTTCCTGAACACCCAAAAGTTGTCACCTTTCACCGTCTGTGTCCTCACGCAGGACCCCAAACAAAGCACCCACATGGAAATTGAGGACCAGGAGCAGCCATCACCTTCTCCTCCACAAGTCTTGTCGCCAAAGTTGGCGGCGAAATTGGCCAGAAAAGAGTCTGAGAGGTCCACCTACCTCGTCGCTGCTGTCATGTCCAGCCTCGGGGTCACATCCATGGCAGTGTTTGCTGTTTATTACAGATTCGCGTGGCAAATGGAGGGTGGAGAAGTGCCTTGGTCTGAAATGTTTGGCACATTTGCTCTGTCTGTGGGTGCTGCTGTGGGTATGGAGTTTTGGGCTAGATGGGCTCATAAAGCTCTCTGGCATGCTTCCTTGTGGCACATGCATGAGTCCCACCATCGACCAAGAGAAGGACCCTTCGAACTGAACGATGTATTTGCCATAATCAATGCTGTCCCTGCCATCGCTCTCCTTTCCTACGGTTTCTTTCACAAGGGACTCATCCCTGGTCTTTGCTTCGGTGCGGGTCTTGGAATTACTGTCTTTGGGATGGCCTACATGTTTGTCCACGATGGCTTGGTTCATAAGAGATTCCCTGTGGGCCCCATTGCCAACGTGCCCTATTTCAGAAGAGTGGCTTCTGCTCACCAACTTCACCATTCAGAAAAATTTGATGGCGTACCGTATGGGCTGTTTATGGGACCAAAGGAAGTGGAAGAAGTGGGAGGGCTAGAAGAGCTGGAGAAGGAGATAAGTAGGAGAGCAAGATTATACAAAAACAGTTCATCATAG 921 0.5114 MAVGLSAAITLKPFLRHHHPHFPKAIPATLPFSPLRISHHTTFLNTQKLSPFTVCVLTQDPKQSTHMEIEDQEQPSPSPPQVLSPKLAAKLARKESERSTYLVAAVMSSLGVTSMAVFAVYYRFAWQMEGGEVPWSEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSYGFFHKGLIPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRRVASAHQLHHSEKFDGVPYGLFMGPKEVEEVGGLEELEKEISRRARLYKNSSS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02083 306 Pfam Fatty acid hydroxylase 148 275 IPR006694 GO:0005506|GO:0008610|GO:0016491
Viun4g02083 306 Coils Coil 287 306 - -
Viun4g02083 306 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 1 302 IPR045019 GO:0016491
Viun4g02083 306 MobiDBLite consensus disorder prediction 64 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02083 Viun-Chr4 36484614 36487128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02083 1 218 Chloroplast and Mitochondria Gene Families AT4G25700 58.850 8.69e-90 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02083 K15746 - gmx:100785541 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g02083 4 36484614 36487128 Viun7g03198 7 34472773 34474867 ECH
Viun4g02083 4 36484614 36487128 Viun4g02083 4 36484614 36487128 ECH
Viun4g02083 4 36484614 36487128 Viun7g03198 7 34472773 34474867 PCT