Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02079 ATGAAGGTCTCATTATCAACACCATTCTCTAGCATACCATTATGGGCTTTGCTTGTGGTAGTTTCAGTATCAGCATTCATTGTTGTGACGTGCATCATCTTGTGCTTTTGCTTCATGTATTATCCTCGTAAAAAACCATACAAACCTTTTTCTTTACCTAAATCAATAGCTTGCAAGCACCACAGTGGTGATTTTAGCTCATCCTCTCTTGACAAGAGGTTGCTATCAGCATCAGGGAATGTCTCAGAACACAGTATGAACTTTGAAAAGTTGTCATCAGGTTATTACAATCACGATTTGTTGATACGTGGTCAAAATTCAAATGATTGGTATTTGGAAGGTTTGGGATCAAAAGGTAAGTTATGTTCCACGTTCAATGATAAGAGTAAGGGGTGGAACTTTAGCCTTAAGGAGATAGAGGATGCTACTAATGGATTTGCTAAAGATAATGAAGTTGGAAGTGGAGATAATGGGATTGTTTATCTTGGCTTGTTACCAAGTAATAGACAAGTTGCAGTGAAGAGACTAGTATGTAACAGTCACCAATCAGATGAACTTTTTGCATCCCAAATGGAAGCAATTGGACTAGCAAAGCACACTAACCTAGTCAAATTATTTGGATATTGTGCAGAGGGTGCTTACAGGATGACAGTATCTGAATATGTAGAACATGAAAGTCTGCATCATTGA 690 0.3783 MKVSLSTPFSSIPLWALLVVVSVSAFIVVTCIILCFCFMYYPRKKPYKPFSLPKSIACKHHSGDFSSSSLDKRLLSASGNVSEHSMNFEKLSSGYYNHDLLIRGQNSNDWYLEGLGSKGKLCSTFNDKSKGWNFSLKEIEDATNGFAKDNEVGSGDNGIVYLGLLPSNRQVAVKRLVCNSHQSDELFASQMEAIGLAKHTNLVKLFGYCAEGAYRMTVSEYVEHESLHH 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02079 229 ProSitePatterns Protein kinases ATP-binding region signature. 152 174 IPR017441 GO:0005524
Viun4g02079 229 SUPERFAMILY Protein kinase-like (PK-like) 131 228 IPR011009 -
Viun4g02079 229 ProSiteProfiles Protein kinase domain profile. 146 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun4g02079 229 Gene3D Phosphorylase Kinase; domain 1 115 221 - -
Viun4g02079 229 Pfam Protein tyrosine and serine/threonine kinase 149 228 IPR001245 GO:0004672|GO:0006468
Viun4g02079 229 PANTHER OS01G0323000 PROTEIN 4 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02079 Viun-Chr4 36475175 36476557 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02079 133 229 Receptor kinase-like Gene Family AT3G45860 43.299 1.25e-18 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Viun4g02079 PK_Tyr_Ser-Thr 1.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02079 - - vun:114180854 462.611