Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02032 ATGACTCATGAGGATTGGGATCTCTTTGCCATCGTTAGAAGTTGTAAAGCTGCCACCTTTACTGCCACCACAACCACACAAAACCCACCCACCGTGACTTCCACCGCCGCTTCTATATCTCCGAACACCACCTCTTGCTTTGATTCCGGCCACGAGAATGGCTCATTCTCTTTCCCCAATCTTGTGCAGCCACCGACCAATGAGTCTCAAGAGCTTCACCAGTTGCTAATAAACTTCAACCCCACCACCACCACCTCCACCATTTCTAGCACTATCACTAGTGCTATTGGCATCAATCCCAATTCCACTTTTTCTGAAGTTGCGGGATTCATTGGACAACAGCATATACAACAAGGTCATCACCATCATCTTGTTCCTGCTCCCACAAATCACACCTCCATTGGAGCACCCTCCACTACTGCTTTTGACAGATTCCAACACCAGCACCACCAACAACAACATCAAGCCCAAACCCCAGAACAACAGTTACAGAAGCAAAATCTGCCTCAACTTCGAGCATCCCAAACAAGTCCTATTCTTTCACCAACTACGCAATCACAAACACCCAGATCAAGAAAGAGAAAGAACCACCAGAAGAAAATTGTGCGTCATGTAACCGCAGACAACCTCTCAGCAGACTCATGGGCATGGCGAAAATATGGTCAAAAACCAATCAAAGGCTCTCCGTATCCAAGGAACTATTACAGATGCAGTAGCTGCAAAGGCTGTGCTGCGAGAAAGCAAGTGGAGCGAAGCACCACCGAACCCAACTCGTTCATCGTCACCTACACCGGCGAACACAAACACGCCAAACCCGTTCACCGGAACTCCCTCGCCGGCAGCACCCGAACCAAGCCATCTCCGACCCGTTTACCCGAAGCCAACGAAACTGTTTCTGGTATCAAAGAAAACGCGTGTTCATCGACTTCTGAGCTTTCTACCACGTCGTTGAAGTCCGGCACGCCGGAGAACGAGGAAACAGTCGCCGCCGGTGAACCTGATTTCCCTGAGATGGAAATTGACCCTGACGCGTTGTCTGATAACGACTACGACCTTCTGATACCCAACACGGGTGCCATGTCGGACGCTGTTCTCTTGGGGTTGACCAATGGAGCTGAAACAAAGATATCGGATCCGAATAGCGAATCCGGGTTGACCCAGTCCAAATCAGACCCTTCTTCCAACCCGTTGTAG 1194 0.4983 MTHEDWDLFAIVRSCKAATFTATTTTQNPPTVTSTAASISPNTTSCFDSGHENGSFSFPNLVQPPTNESQELHQLLINFNPTTTTSTISSTITSAIGINPNSTFSEVAGFIGQQHIQQGHHHHLVPAPTNHTSIGAPSTTAFDRFQHQHHQQQHQAQTPEQQLQKQNLPQLRASQTSPILSPTTQSQTPRSRKRKNHQKKIVRHVTADNLSADSWAWRKYGQKPIKGSPYPRNYYRCSSCKGCAARKQVERSTTEPNSFIVTYTGEHKHAKPVHRNSLAGSTRTKPSPTRLPEANETVSGIKENACSSTSELSTTSLKSGTPENEETVAAGEPDFPEMEIDPDALSDNDYDLLIPNTGAMSDAVLLGLTNGAETKISDPNSESGLTQSKSDPSSNPL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02032 397 ProSiteProfiles WRKY domain profile. 206 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun4g02032 397 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 338 IPR044810 GO:0003700
Viun4g02032 397 MobiDBLite consensus disorder prediction 117 200 - -
Viun4g02032 397 SUPERFAMILY WRKY DNA-binding domain 206 272 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun4g02032 397 MobiDBLite consensus disorder prediction 373 397 - -
Viun4g02032 397 Pfam WRKY DNA -binding domain 213 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun4g02032 397 Gene3D WRKY domain 194 265 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun4g02032 397 MobiDBLite consensus disorder prediction 277 323 - -
Viun4g02032 397 MobiDBLite consensus disorder prediction 267 344 - -
Viun4g02032 397 SMART WRKY_cls 211 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun4g02032 397 MobiDBLite consensus disorder prediction 330 344 - -
Viun4g02032 397 FunFam WRKY transcription factor 22 194 265 - -
Viun4g02032 397 MobiDBLite consensus disorder prediction 131 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02032 Viun-Chr4 36094580 36096592 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02032 190 289 WRKY Transcription Factor Family AT5G52830 77.000 1.21e-50 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun4g02032 WRKY 4.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02032 - - gmx:100796829 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g02032 4 36094580 36096592 Viun7g03187 7 34412245 34414573 ECH
Viun10g01982 10 34532272 34534076 Viun4g02032 4 36094580 36096592 ECH
Viun5g00823 5 5184180 5186153 Viun4g02032 4 36094580 36096592 ECH
Viun10g02618 10 39752376 39757458 Viun4g02032 4 36094580 36096592 ECH
Viun4g02032 4 36094580 36096592 Viun4g02032 4 36094580 36096592 ECH
Viun4g02032 4 36094580 36096592 Viun7g03187 7 34412245 34414573 PCT