Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g02017 ATGACAACAGAAATGGAAGATAAAGAGTTCTACATTACATCATGCACGTACTTGCCCCCTCGGGTGAATTCAGATATACCATGGTGCACCACAACTGGCAGGCTTCCGACTAATGCTTTACCAATGTTGGAGATGCAGATATGTATTATCTTTCTTTCAACCTTTCTCTTGCACACCGTTCTGGGTCGTTTAAGATTCCCCAGATTCACTTCCATGAGCATTGTTGGTCTAATGCTTGCAACCAGCTTCACAGAAGAATGGGCTCGGAAGTGTAGAGAGTTGTTCTTTTTTGACTCTCAGGCAAGTCTGGGGATGCTTTCAGTTTTTGGCTACATGCTTTTCCTGTTCTACACAGGGGTGAAAACAGACGTGAGTGTGATTCCCAGGACCAAAAGTAGTGCAGCCACCATAGGGTGTGTTTCCATACTAGCTCCCTTTATATGCAGCATGGCTGTTGTGAATTTATACTCCACAAAATACCTGGACAGTGATCAGGTAGCAAAAGTTAGACTCATCACTGGTGTGTTCTCGGTGACTCCTTTCCCTAACATTTGCACAGTTTTAAGTGATCTCAAGATTCTGAATTCGGAGCTAGGTAGATTAAGCCAGTCCGCAGCTTTGGTTACCGAGCTCTTTAATGTGGTCTTCACATCAACCCTTAGTATCTCCAAAATCTTGTCTAGTGATCCACCAAAAGCCTGGTTTTGCCTCACAGTTTTGATTTTGTTTTTGCTAATGGTTTTGTTCGTGTATCGCCCAGCCACGTTCTGGATCATAAAACAGACCCCAGAGGGTTCTCCTGTTAGTGATCACTATGTGTATTTCATACTCATTATGGCTTTTGTGGCTTCCTATATCACACATCGCATTGGATTTTTGGCTCTCTTTGGCCCTTTTGTATTGGGCATGGCTACCCCAGAAGGGCCTCCATTAGGCACTGCCATTATAAAAAAGATTGATACTTTTGTTAACTGGATGTTCATGCCTCTCTTTGTGACCACATGTGTGATGAGGGTGGACCTCAGAGACTTCATGAAATGGAGAGACGAAGTGAGTGGAGGAATCGACCAGTTCATGCTGCAAGCCCTGATTATCATTGCAGTGACTAGCGGTATCAAATTTCTTGTATGCATGCTGCTTCCTTTGTACCACAACGTGCCCTTGAGTGACTCAGTGTCTCTTTCTTTGGTCATGAGTTGCAAGGGCGTAGTTGAATTGGCTGGATTCTCTATAATCAGAGATCTCATGGTTAGCACTCTCTTTCATGTCTTCTTAGTTATCACTTGTTCCATCTTCATTGTATATAAGTTTGACAGCAAAAACAAACATGATTCTAGGATAATGCTTGTGTTCGCTATGTCTGTAATGCAGGGAATACCAGACAACGTGTTGGCACTGGTGCTAGTGAGCATAATTATAAGTGCTACAGTGGTGCCATTTCTTCTGGCATACCTCTACGATCCCATGAAGAAATACGCAGGAAACTACACCAAACGAAACATCTTCGACCTCAAAAACAACTCCGAGCTTCGAGTTCTCACATGCATCCACAGACCCGACAACATTCCTCCGACCATCAACCTTCTCGAAGCCACCTTCCCCACCAAAGACAACCCTCTCTGTGTCTACGTCCTCCAGCTCATAGAACTCATCGGAAGAGCTGCTCCTGTCTTCATCTCTCACCAACTCCAATCCAAGAAAAAACACGACGCAAACGCTTCCATGGCAGACAAACTCATCGATGCGTTCCAAAACTTCGAGCACGAGTTCAACGATGCACTGGTGGTGAACACCTTCACGTCAATCTCACCAACCGAGTTGATGTACGATGACATCTGCACTTTGGCGTTGAACAAGTTCACCTCCCTCATTGTTCTTCCCTTTCACAAAAAGTGGTCTTCTGATGGCAACAGCATTGAGATAGAAGATGAGTCTCTGAGAGAGTTGAACTTCCGTGTCATGCGGAGAGCTCCGTGTTCGGTTGGGATATTGATCGAGAAAATGCAAATGACGCATATTTTCTCCCCCGAGACACCTTACACTGTTTGCATGCTTTTCATTGGAGGGAAAGACGATAGAGAAGCACTTTACTTTGCTAAGAGGATGACCAAAAATCCGAATGTTAGACTCACTGTGGTGAGGTTTTTGGCTAGGAAAAACTATTCGGAGGTAACGGATTTGCAGGAACTGCTTGACACTGAGATTCTGTATGATATCAGGGTTAACGGGAAGGTGGGTGAGGCTAATGTGAATTACATAGAGAAGATTGTGAAGGATGGACCTGAGACGGCTTTGGTGATTCGGAAGTTGGTGAAGGAGTATGATTTGATCATTGTTGGAAGACAAGCTGGGATTGAAACTCCTCAAACTTCTGGGTTGTTGCAGTGGAGTGAGTATCCAGAACTTGGGGTGCTTGGTGATTTGTTGGCTTCAACTGATGCTGCTGGCAGGGCTTCTGTGTTTGTGATGCAGCAACAAAGAAGACCCAGGGATGCTTGA 2499 0.4466 MTTEMEDKEFYITSCTYLPPRVNSDIPWCTTTGRLPTNALPMLEMQICIIFLSTFLLHTVLGRLRFPRFTSMSIVGLMLATSFTEEWARKCRELFFFDSQASLGMLSVFGYMLFLFYTGVKTDVSVIPRTKSSAATIGCVSILAPFICSMAVVNLYSTKYLDSDQVAKVRLITGVFSVTPFPNICTVLSDLKILNSELGRLSQSAALVTELFNVVFTSTLSISKILSSDPPKAWFCLTVLILFLLMVLFVYRPATFWIIKQTPEGSPVSDHYVYFILIMAFVASYITHRIGFLALFGPFVLGMATPEGPPLGTAIIKKIDTFVNWMFMPLFVTTCVMRVDLRDFMKWRDEVSGGIDQFMLQALIIIAVTSGIKFLVCMLLPLYHNVPLSDSVSLSLVMSCKGVVELAGFSIIRDLMVSTLFHVFLVITCSIFIVYKFDSKNKHDSRIMLVFAMSVMQGIPDNVLALVLVSIIISATVVPFLLAYLYDPMKKYAGNYTKRNIFDLKNNSELRVLTCIHRPDNIPPTINLLEATFPTKDNPLCVYVLQLIELIGRAAPVFISHQLQSKKKHDANASMADKLIDAFQNFEHEFNDALVVNTFTSISPTELMYDDICTLALNKFTSLIVLPFHKKWSSDGNSIEIEDESLRELNFRVMRRAPCSVGILIEKMQMTHIFSPETPYTVCMLFIGGKDDREALYFAKRMTKNPNVRLTVVRFLARKNYSEVTDLQELLDTEILYDIRVNGKVGEANVNYIEKIVKDGPETALVIRKLVKEYDLIIVGRQAGIETPQTSGLLQWSEYPELGVLGDLLASTDAAGRASVFVMQQQRRPRDA 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g02017 832 PANTHER CATION/H + ANTIPORTER 38 828 - -
Viun4g02017 832 Gene3D - 42 443 IPR038770 -
Viun4g02017 832 Pfam Sodium/hydrogen exchanger family 47 432 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g02017 Viun-Chr4 35854325 35857168 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g02017 39 827 Antiporter Super Family AT5G22900 34.055 5.45e-153 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g02017 K26731 - gmx:100785558 1154.81