Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01967 ATGGAGCCATATCAGTCAGCAGATAACATCCCGTTCGAGGAACATTTGGAAATCAATATACCAAATGCGCAGCCTGAACAAGTACACGTCAAAAGTGGTCTGCTTCACAATGACTCCGCAGATGATATTACACCCAAAGTACACATGTGTTTTGATAGCTTAGATGATGTAAAACAGTTTTATAAAAATTACGGTATTAGAAGCGGCTTTGGTATTCGGACGAGGACTTCAGCAAGGGGCGAAGACAATGAAATCAACTACATCAAGTTGGTGTGTTCACGGGAGGGAAATTATGTGTCCGCTATTCCCCCTGAATTGAAGACCGTCCCAACTAAAGCAAAACAGTGTAAAGCTTCAATCACTGCAGCAAAGAAAGACGGACAATGGTTCATTAGGAGCGTTGTAACTGATCACAGTCATGACATTAGTCCAAAGAAGTCAAGGCTAATACGGGGCAACCGTAAAGTTGACATGCATTCAAGGCAAACTGTTGAGACTAACGATGACGCTGGTGTCCGAATTAACAAAAGTTTCCGCTCTCTTGTCTCTGAAGCAGGTGGATATGAAAACGTTAACTTCATTGAGCGTGATGTTCGCAACTACATTGGTCAACAAAGGCGATCATTGTGTAAGGATGGGGATGGGCAGGCCCTTTTACGACATTTTTCAAAAATGCGGGAATTAAACAATGACTTCTTCTTTGAAATTGACATGGACGAAGACAACCGTATATGTAATGTTTTTTGGGCCGATGCGCGCAGTAGAGCGGCATCTGAGGATTTTGGTGATGTTGTGTCTTTTGACACCACATATCTGACCAACAAATATGACATGCCTTTCGCTCCATTTGTAGGTGTTAATCACCATGGACACTCCATTTTATTAGGTTGTGGTCTAGTATCAGCTGAAGACACAAGGTCTTTCGTGTGGATTTTTGAATGCTGGCTTCGGTGCATGTATAACAAACCACCGAAAGGAATTGTTACCGACCAATGTAAGGCAATGCTTAATGCAATTGCACAAGTTTTCCCTAGTACCAAACATCGATGGTGTCTATGGCACATAATGAAAAAAGTCCCGGAAAAATTGCAAGGTTACACTAAATACAAATCTATCAAGGGTGAATTGAAAAGACTAGTGTATGATTCAGTCACGGTGGGAGAGTTTGAGTTGGGATGGCACGCTTTTATTGGACAATATGATTTGTCCACAAACGACTGGCTCACCACATTGTTTGACGAGAGACATCGTTGGGTTCCTTGCTACCTTAAAAGTCAGTTTTGGGCTGGAATGTCAACCACCCAAAGGAGTGAAGGCCTCAACGCTTTTTTTGATGGGTTCATTAATTCGGGAACTACTTTGCAACAATTTGTTGTGCAATATGACAACGCACTACGGCAAAAGGCAGAAAAAGAATTTGAAGCTGACTTTGCTTCATCCAATACCACTGTTGCATGTGGATCACAATCTCTTATTGAGAGGCAATTTCAAGTAGAGTACACACATGCAAAATTTGCGGAGGTCCAGAACGAATTTAGGGGAAAGATTAATTGTTTCGTCAAAAGGGTGTTCGAAGACGGATGTCTGCTTAAATATGCTGTAAAGGAAGAGTGGTTGTGGGAGGGAAAAAAATACCACAGAATGCATGATGTTGTGCTCGACACGCTGATAACCAATATCCATTGTAGTTGTATGTTGTTTGAGTTTAGGGGGATCATGTGTCGTCACACCTTGTTGACTCTTAGACAAGAAGACATTGAGTGCGTGCCAGAAAAATATGTTCTCCGTCGCTGGTCCAAAAATGTTAGGAGGAGGCATAGTTTGATAATAGCGGGATACAATAGAAGTAATGACGACCCACGGATGCAAAAATACAAAGTCTTATGCAAGAGGTTTTACGATTTAGCGGAGGTGGCATGTGACTCAGACGCTTCATCTACGATGTTGTTCAATGAGATGAATTCTATTGCTAAAGGACTAGGTGTCCCTACCAAATCTAATCCTTTTATACTTAGCCAAGAAGGTGACATTGAAGACAATGGGGGTGAACATCCATGTGTCACTAACTGCAGTAATGTTCGCAGCCCAGTACATGTTAAGAGGAAGGGGAGACCGAGAACTAACAGATTACAATCAACAGTGGAAAAGCTATCAAAGAAAAAGAAAACGAGTGCGGGCAAAAACAAGTCACAAAGAACTTCACAGGAACCTATTGACGTCGATGTGCCCTTAGACTCACAATGTACCCAACTGACAGACGAAGCCAGGATTGGACCATACATTCCGAACAGTGGTTTCATGTCGCTGCTGACATGTATGGAGGCAGAGATTGTTAACACTCAAATTCGCATCATGGCCGCAAATTTGAGTGAAAGTGTGGGGGAAAACAATGTTCCAGCAGAAGCCGTTGCAGAGAGGACGGTATTGTGGACTTTCACAACCATCAACATTCATGGTCAGAACTTCGCCTATGTCGATCGTCATTTTTCGGCGGCATTTGAAAACGAACTACAGGACCAATGGACTTTAGTTGATACTTTTGGGAACACCTTTGTGGTGACTTACAACATGGATACATTGAACCCAAAATTAACTAATGGATGGAAAGACATAGAGAACACATACACTGACCAATTAGTGGACTCATATGTTCAGCTTCGTTACGTTGGAGGCAATCGCTTTCAAATAACTTGTTTTGTGGGCCTATGCGAACCACACAATAAGGAGTCGTTTTTGTTAGGTGCTGAAACGCACCCTGGGACAGCCCTATACGCTGTGAAGTTGACGAAATCTCAGGCACAAGCTAGCCATCTGGACCTCAACGTTGGTTTTGGTGACATCATAAGAAGCCTACAAATGGATGTGGTTTACCTTTTGGGATCAAGAAGTGGAGTAGAGTGCAAACTGCTGGTTTCCCGGAATAACAGATCAACCAAGTTTGGACAAGGGTGGAGGCAGTTCTGTGTTCGCAACCAATTGAAGGAAGGAGACAGACTTGTGTTTGAGGTTGACCATCTGCAGAAACAATGCATAATTGAGGTTTTCATCAATGGCTGCAATTGTGATGTGGCCAAGTCCATCAATTTAGACTAA 3093 0.4258 MEPYQSADNIPFEEHLEINIPNAQPEQVHVKSGLLHNDSADDITPKVHMCFDSLDDVKQFYKNYGIRSGFGIRTRTSARGEDNEINYIKLVCSREGNYVSAIPPELKTVPTKAKQCKASITAAKKDGQWFIRSVVTDHSHDISPKKSRLIRGNRKVDMHSRQTVETNDDAGVRINKSFRSLVSEAGGYENVNFIERDVRNYIGQQRRSLCKDGDGQALLRHFSKMRELNNDFFFEIDMDEDNRICNVFWADARSRAASEDFGDVVSFDTTYLTNKYDMPFAPFVGVNHHGHSILLGCGLVSAEDTRSFVWIFECWLRCMYNKPPKGIVTDQCKAMLNAIAQVFPSTKHRWCLWHIMKKVPEKLQGYTKYKSIKGELKRLVYDSVTVGEFELGWHAFIGQYDLSTNDWLTTLFDERHRWVPCYLKSQFWAGMSTTQRSEGLNAFFDGFINSGTTLQQFVVQYDNALRQKAEKEFEADFASSNTTVACGSQSLIERQFQVEYTHAKFAEVQNEFRGKINCFVKRVFEDGCLLKYAVKEEWLWEGKKYHRMHDVVLDTLITNIHCSCMLFEFRGIMCRHTLLTLRQEDIECVPEKYVLRRWSKNVRRRHSLIIAGYNRSNDDPRMQKYKVLCKRFYDLAEVACDSDASSTMLFNEMNSIAKGLGVPTKSNPFILSQEGDIEDNGGEHPCVTNCSNVRSPVHVKRKGRPRTNRLQSTVEKLSKKKKTSAGKNKSQRTSQEPIDVDVPLDSQCTQLTDEARIGPYIPNSGFMSLLTCMEAEIVNTQIRIMAANLSESVGENNVPAEAVAERTVLWTFTTINIHGQNFAYVDRHFSAAFENELQDQWTLVDTFGNTFVVTYNMDTLNPKLTNGWKDIENTYTDQLVDSYVQLRYVGGNRFQITCFVGLCEPHNKESFLLGAETHPGTALYAVKLTKSQAQASHLDLNVGFGDIIRSLQMDVVYLLGSRSGVECKLLVSRNNRSTKFGQGWRQFCVRNQLKEGDRLVFEVDHLQKQCIIEVFINGCNCDVAKSINLD 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01967 1030 Pfam B3 DNA binding domain 960 1008 IPR003340 GO:0003677
Viun4g01967 1030 SMART 26again6 560 587 IPR006564 GO:0008270
Viun4g01967 1030 ProSiteProfiles B3 DNA-binding domain profile. 923 1020 IPR003340 GO:0003677
Viun4g01967 1030 Pfam MULE transposase domain 264 358 IPR018289 -
Viun4g01967 1030 Gene3D - 924 1019 IPR015300 -
Viun4g01967 1030 SUPERFAMILY DNA-binding pseudobarrel domain 923 1019 IPR015300 -
Viun4g01967 1030 CDD B3_DNA 968 1002 IPR003340 GO:0003677
Viun4g01967 1030 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 38 658 IPR031052 GO:0006355
Viun4g01967 1030 Pfam FAR1 DNA-binding domain 59 143 IPR004330 -
Viun4g01967 1030 MobiDBLite consensus disorder prediction 697 737 - -
Viun4g01967 1030 ProSiteProfiles Zinc finger SWIM-type profile. 549 585 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01967 Viun-Chr4 34840399 34844401 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun4g01967 MULE 1.1e-33 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01967 - - vun:114180824 2112.42