Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01854 ATGGACCACAGTGCCGATGCACTGCGCACGGACTTGATGACCATAACGCGTTTCGTGTTGAACGAGCAATCCAAGCACCCCGAGTCACGCGGCGATTTCACCATCCTTCTCAATCACATTGTTCTCGGTTGCAAGTTCGTTTGCTCCTCGGTTAATAAGGCTGGACTTGCTAAGCTTATTGGACTCGCTGGAGAGACCAATGTTCAGGGTGAAGAACAGAAGAAACTAGATGTTCTTTCCAATGAGGTTTTTATCAAGGCTCTCGTAAGCAGTGGCCGAACTTGCATCTTGGTTTCTGAAGAAGACGAAGACGCGATAATTGTGGAGCCATCTAAGCGTGGAAAGTACTGTGTTGTTTTTGACCCCTTGGATGGCTCGTCTAACATTGATTGTGGGGTTTCCATTGGCACTATTTTTGGAATTTATACGTTAGCGGATGTCCATGAACCAACTGTAGAGGATGTCCTGCGTCCTGGGAAGAAAATGGTGGCAGCTGGTTATTGTATGTATGGAAGCTCTTGCACGCTTGTGATAAGTACTGGAGCTGGTGTTAATGGTTTCACCCTTGACCCATCTCTTGGTGAATTCATCCTAACTCACCCTGGCATTAAGATCCCAAAGAAAGGAAATATTTATTCAGTTAATGAAGGAAATGCCAAACACTGGGATGGTCCTACTGCAGCTTACGTTGAAAAATGCAAGTTTCCAGAAGATGGTTCATCGCCAAAGTCTCTAAGATATATTGGAAGCATGGTAGCTGATGTTCATCGTACATTGCTTTACGGAGGCATCTTTTTGTACCCTGGTGATAAGAAAAATCCAAATGGAAAACTTCGTGTTTTGTATGAAGTCTTCCCAATGTCATTTTTGGTGGAACAGGCAGGAGGACAGTCTTTCACGGGCAAGGAAAGGGCACTTGATTTAGTTCCAACGAAGTTGCACCAGCGATCTCCCGTTTTCCTTGGTAGCTATGATGATGTTGAGGAAATCAAAGGGCTTTATGCTGCTGCTGCTGCTGAGGGTGAAGCAGAATGA 1035 0.4512 MDHSADALRTDLMTITRFVLNEQSKHPESRGDFTILLNHIVLGCKFVCSSVNKAGLAKLIGLAGETNVQGEEQKKLDVLSNEVFIKALVSSGRTCILVSEEDEDAIIVEPSKRGKYCVVFDPLDGSSNIDCGVSIGTIFGIYTLADVHEPTVEDVLRPGKKMVAAGYCMYGSSCTLVISTGAGVNGFTLDPSLGEFILTHPGIKIPKKGNIYSVNEGNAKHWDGPTAAYVEKCKFPEDGSSPKSLRYIGSMVADVHRTLLYGGIFLYPGDKKNPNGKLRVLYEVFPMSFLVEQAGGQSFTGKERALDLVPTKLHQRSPVFLGSYDDVEEIKGLYAAAAAEGEAE 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01854 344 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 13 201 IPR033391 -
Viun4g01854 344 Gene3D - 204 343 - -
Viun4g01854 344 Gene3D - 4 203 - -
Viun4g01854 344 PRINTS Fructose-1,6-bisphosphatase signature 186 209 IPR028343 GO:0042132
Viun4g01854 344 PRINTS Fructose-1,6-bisphosphatase signature 155 178 IPR028343 GO:0042132
Viun4g01854 344 PRINTS Fructose-1,6-bisphosphatase signature 75 101 IPR028343 GO:0042132
Viun4g01854 344 PRINTS Fructose-1,6-bisphosphatase signature 212 239 IPR028343 GO:0042132
Viun4g01854 344 PRINTS Fructose-1,6-bisphosphatase signature 38 65 IPR028343 GO:0042132
Viun4g01854 344 PRINTS Fructose-1,6-bisphosphatase signature 310 335 IPR028343 GO:0042132
Viun4g01854 344 ProSitePatterns Fructose-1-6-bisphosphatase active site. 276 288 IPR020548 GO:0005975|GO:0042578
Viun4g01854 344 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 3 335 IPR000146 GO:0005975|GO:0016791
Viun4g01854 344 PIRSF FBPtase 9 338 IPR028343 GO:0042132
Viun4g01854 344 Hamap Fructose-1,6-bisphosphatase class 1 [fbp]. 13 336 IPR000146 GO:0005975|GO:0016791
Viun4g01854 344 FunFam Fructose-1,6-bisphosphatase, cytosolic 4 203 - -
Viun4g01854 344 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 205 334 IPR044015 -
Viun4g01854 344 PIRSF FBPtase_SBPase 9 339 IPR000146 GO:0005975|GO:0016791
Viun4g01854 344 CDD FBPase 20 334 IPR000146 GO:0005975|GO:0016791
Viun4g01854 344 SUPERFAMILY Carbohydrate phosphatase 8 333 - -
Viun4g01854 344 FunFam Fructose-1,6-bisphosphatase class 1 204 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01854 Viun-Chr4 33265015 33270779 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01854 K03841 - gmx:100807451 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g01854 4 33265015 33270779 Viun4g01854 4 33265015 33270779 ECH
Viun4g01854 4 33265015 33270779 Viun7g03135 7 33944790 33948341 PCT