Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01850 ATGGAAGGGAATTTGTCTCAGGGAGGTATGGTTCAAGGTGGGAGTTCCTTTGGTGGTTTTGATCTGCCTGGATCAATTAGGGTTCATCGGCAAGGGCACCATCCTCATTCCATGAATCAACATCAAACTCATCCTTGCCAAGGCCCTTCAGTGCATTCCTCAGTTCATGATGGTTTTCCTCTCACAATGGGAACCTTGCAGAACTGCGATCAAACAATGCCAATGACTGAGTTTAGTCAGGGCGATAGAAACAAGAACTCACCAAGTGATGAAAGCTTTGCTGAGGAAGGTGTTGATGGTCATCATGAAGGAGGTAGAGGGAAAAAAGGGTCGCCTTGGCAACGGGTGAAGTGGACCGATAAGATGGTGAGGCTTCTGATAACGGCTGTTTCTTACATAGGTGAGGATTCAACATCTGACTGTGGTGGCGCAAGGAGAAAAATTACAGTCCTACAGAAAAAGGGGAAGTGGAAATCGGTTTCCAAGGTCATGGCTGAAAGAGGTTATCGTGTTTCACCTCAGCAGTGTGAGGATAAATTCAATGATCTTAATAAGAGGTACAAAAAGCTTAATGATATGCTAGGCCGTGGAACTTCTTGTCAGGTTGTTGAGAATCCTTCTCTGTTGGATGTGATAGATTACCTTTCTGAGAAAGAAAAAGATGAGGTTCGAAAAATATTGAGCTCAAAGCACTTGTTCTATGAAGAGATGTGTTCTTACCATAATTGTAACAGGTTGCATTTACCCCATGATCTGGAATTGCAACGATCACTGCAGTTGGCTCATAGAAATAGAGATGATCACGACAGTGATGATGTCAGAAGGTCTCATCATGAGGATCACGATGAAGATGATCTAGAAGTGGAAACTGATGATCATGATGACTTTGAGGAGAATTATGCTACTCATGCAGATAGTAGAGGAGCCTATGGGGAAGCGGGGCGACCTATGAAGAGATTGAAAGCAGGGCAAGGACATGAAGATGCTGCTACTTTTGGCAGTGCTTTAAACAACCAAGAGTACAACAAAAGTTCATATCCTTATATGGTTCAATCTGATGTTAATCAAGCTGCACCCGAGAAAATGAGTTCAGCATGGTTACAGAAGCAATGGGTTGAATCTCGTTCACTTCAGTTAGAAGAGCAGAAGCTGCAGATTCAGGTTGAGATGTTGGAGCTGGAGAAACAAAGATTCAAGTGGCAGAAGTTTAGTAAGAAAAAGGACCGGGAGCTGGAAAAGTTGAAGCTGGAGAATGAAAGAATGAAGCTTGAGAATGAACGTATTGCTTTAGAACTCAAACGAAAGGGAGTGGCTGCTGACTTTAACTAA 1329 0.4304 MEGNLSQGGMVQGGSSFGGFDLPGSIRVHRQGHHPHSMNQHQTHPCQGPSVHSSVHDGFPLTMGTLQNCDQTMPMTEFSQGDRNKNSPSDESFAEEGVDGHHEGGRGKKGSPWQRVKWTDKMVRLLITAVSYIGEDSTSDCGGARRKITVLQKKGKWKSVSKVMAERGYRVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPSLLDVIDYLSEKEKDEVRKILSSKHLFYEEMCSYHNCNRLHLPHDLELQRSLQLAHRNRDDHDSDDVRRSHHEDHDEDDLEVETDDHDDFEENYATHADSRGAYGEAGRPMKRLKAGQGHEDAATFGSALNNQEYNKSSYPYMVQSDVNQAAPEKMSSAWLQKQWVESRSLQLEEQKLQIQVEMLELEKQRFKWQKFSKKKDRELEKLKLENERMKLENERIALELKRKGVAADFN 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01850 442 PANTHER F16F4.11 PROTEIN-RELATED 1 441 - -
Viun4g01850 442 MobiDBLite consensus disorder prediction 74 113 - -
Viun4g01850 442 Coils Coil 374 396 - -
Viun4g01850 442 Coils Coil 404 433 - -
Viun4g01850 442 MobiDBLite consensus disorder prediction 1 54 - -
Viun4g01850 442 Gene3D - 118 189 - -
Viun4g01850 442 MobiDBLite consensus disorder prediction 263 290 - -
Viun4g01850 442 MobiDBLite consensus disorder prediction 88 113 - -
Viun4g01850 442 MobiDBLite consensus disorder prediction 263 283 - -
Viun4g01850 442 Pfam Myb/SANT-like DNA-binding domain 115 240 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01850 Viun-Chr4 33241939 33244277 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Viun4g01850 Myb_DNA-bind_4 2.2e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01850 - - gmx:100812134 638.647