Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01849 ATGCTGGGGGACTCAGCAGTGTTGGGAACAGGAGGAGGAGGAGGGTCTGGAGATGCAGTGGTGGCAGCAGGAGGGGGTGCTGCTCATGACGGTGCTGTTGACGTGGCAGGCGGTGGTGGCGGCGGCGGCGGAGGAGGATCAAATTCAGGGGATGATGAGAGGGGGAGAGTGGAGGAAGGTGACAGAAGCTTTGGTGGGAACAGGTGGCCGAGGCAAGAGACTCTGGCTTTGTTGAAGATACGGTCGGATATGGACGTGGCTTTCAGAGATGCAAGTGTGAAGGGTCCTTTGTGGGAAGAGGTTTCAAGGAAGCTGGCAGATCTTGGCTACCACAGAAATGCCAAGAAGTGCAAAGAGAAGTTCGAGAACGTTTACAAGTACCACAAGAGAACCAAAGAAGGCCGCACTGGGAAATCAGAAGGCAAAACTTATCGCTTCTTTGATCAATTACAAGCCCTCGAAAACAACCCTGCAATTCATGCGATCCAATCCCCAACACCAGTAACCACAACAGCACTACCAGCAACACCAGTCTCAATAGTTGTAACAACGACACCCTCTTCTATAATGTCTCTTCCCCCGACCACAACACTGCCATTGCCACCTGTCTCCAACAACACCACTGTTCCATCCCCAACTACACTCCCTGTGCCTCAAGCCATTCTCGCCCTCACAACAACCCCTTCCTTCCCATCATCAAACCCTACAACATACTTCCCAACACAAACACCAAACCCTACAACCAACAACAACAACAACAAGAACCCTCTGAGCACCATCACCCCACCTTCCTTCCCCAACATTCCCACCGATCTCTTGTCCAATTCCAGCTCCTCCTCCACCTCTTCGGAGGAAACAACCACCGAGGGAGGGAGGCGCAAGAGGAAGAGGAAGTGGAAGGACTTTTTTGAGAGACTCATGAAGGAGGTGATAGAGAAGCAGGAGGAGCTGCAAAGGAGGTTCCTGGAGGCCATAGAGAGGAGAGAACAAGAGCGTGTGGCGAGAGAAGAAGCGTGGAGAATGCAGGAGATGCAAAGGATCAACAGGGAAAGGGAGATTCTGGCACAAGAGAGATCCATTGCTGCCGCTAAAGACGCTGCTGTTATGGCATTTCTGCAGAAGATGGCCGAACATCAACAAGAGGAAAATAATCTTCAGCCAGCATTGAATACCAACAACAACAACAACAGCATCACTATTGCTCCACAGCAACCGGTGCCACAAGCAACTCCAACACCAACACCAGCACCGCAACAAAAACAAACAACAACTGTTGCCGAGGCCCCACCAGTGCAGTCCTTGGTCCCACAGCAACAGCAACATCAGGTGCAGCAACAACAACAGCTAGTGCTGACTAATGTTGAAAGCAATAAAGCTGATAATAACGGTGAGAATTTGATGATGGGAGCGAGTTCTTCGCGGTGGCCAAAAGTGGAGGTACAAGCGCTGATAGATCTGAGAACAAACCTGGAAACGAAGTACCAGGAAAATGGACCGAAGGGGCCACTGTGGGAGGAGATCTCAGCTTTGATGAGAAAAATGGGGTATAACCGGAACGCGAAGAGGTGCAAAGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAAGGTGAAGGAAAGCAACAAGAAGAGGCCAGAAGATTCCAAGACCTGTCCCTATTTTCACCAGTTGGAGGCTCTATACAAGGAGAAGAACAAGGGGGAGGGCCAGATGAAGCCGGAGAGCATGATGGCACCGCTCATGGTGCAGCCGGAGCAACAGTGGCCTCCTCAGCAGGTGGTGCCACCAGAAGTAACCATGGAAGACGCCCAGAATGACCCCATGGACGCGCGGCACCACGAGGATGCTGAGGAGGAGGAGGAGGAGGAGGACAAGGACATCGGAGAGGAAGATGATGATGAAGACGATGAAGGTGGTAACTATGAGATAGTAGCAAGTAAGCCAGCTCCAACTCCAGCTTCAGCTGGTGATGCTTCTGCTGAGTGA 1986 0.5151 MLGDSAVLGTGGGGGSGDAVVAAGGGAAHDGAVDVAGGGGGGGGGGSNSGDDERGRVEEGDRSFGGNRWPRQETLALLKIRSDMDVAFRDASVKGPLWEEVSRKLADLGYHRNAKKCKEKFENVYKYHKRTKEGRTGKSEGKTYRFFDQLQALENNPAIHAIQSPTPVTTTALPATPVSIVVTTTPSSIMSLPPTTTLPLPPVSNNTTVPSPTTLPVPQAILALTTTPSFPSSNPTTYFPTQTPNPTTNNNNNKNPLSTITPPSFPNIPTDLLSNSSSSSTSSEETTTEGGRRKRKRKWKDFFERLMKEVIEKQEELQRRFLEAIERREQERVAREEAWRMQEMQRINREREILAQERSIAAAKDAAVMAFLQKMAEHQQEENNLQPALNTNNNNNSITIAPQQPVPQATPTPTPAPQQKQTTTVAEAPPVQSLVPQQQQHQVQQQQQLVLTNVESNKADNNGENLMMGASSSRWPKVEVQALIDLRTNLETKYQENGPKGPLWEEISALMRKMGYNRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLEALYKEKNKGEGQMKPESMMAPLMVQPEQQWPPQQVVPPEVTMEDAQNDPMDARHHEDAEEEEEEEDKDIGEEDDDEDDEGGNYEIVASKPAPTPASAGDASAE 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01849 661 MobiDBLite consensus disorder prediction 51 66 - -
Viun4g01849 661 Coils Coil 300 331 - -
Viun4g01849 661 Gene3D - 475 536 - -
Viun4g01849 661 Gene3D - 69 130 - -
Viun4g01849 661 ProSiteProfiles Myb-like domain profile. 473 531 IPR001005 -
Viun4g01849 661 PANTHER FI21293P1 45 614 - -
Viun4g01849 661 Pfam Myb/SANT-like DNA-binding domain 473 560 IPR044822 -
Viun4g01849 661 Pfam Myb/SANT-like DNA-binding domain 67 153 IPR044822 -
Viun4g01849 661 MobiDBLite consensus disorder prediction 586 661 - -
Viun4g01849 661 FunFam Trihelix transcription factor GT-2 69 130 - -
Viun4g01849 661 MobiDBLite consensus disorder prediction 378 427 - -
Viun4g01849 661 MobiDBLite consensus disorder prediction 615 639 - -
Viun4g01849 661 MobiDBLite consensus disorder prediction 1 68 - -
Viun4g01849 661 MobiDBLite consensus disorder prediction 378 405 - -
Viun4g01849 661 FunFam Trihelix transcription factor GT-2 475 536 - -
Viun4g01849 661 SMART sant 471 533 IPR001005 -
Viun4g01849 661 SMART sant 65 127 IPR001005 -
Viun4g01849 661 ProSiteProfiles Myb-like domain profile. 67 125 IPR001005 -
Viun4g01849 661 CDD GT1 473 538 - -
Viun4g01849 661 CDD GT1 67 132 - -
Viun4g01849 661 MobiDBLite consensus disorder prediction 226 296 - -
Viun4g01849 661 MobiDBLite consensus disorder prediction 226 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01849 Viun-Chr4 33179385 33183023 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01849 65 587 Trihelix Transcription Factor Family AT1G76890 46.765 5.95e-147 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Viun4g01849 Myb_DNA-bind_4 4.7e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01849 - - gmx:100804788 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g01849 4 33179385 33183023 Viun4g01849 4 33179385 33183023 ECH
Viun4g01849 4 33179385 33183023 Viun7g03133 7 33918326 33921763 PCT