Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01846 ATGAAGAGTTTTCTGTTTCGATGTGTGGCCATTGTGGAGAAAAATAAACCTTATGTTGCAATGCTTTTTGTTCAGTTTGTGTATGCAGGAATGGCTTTGTTGTCCAAAGCTGCAATTTCCAAGGGAATGAGCCCTTATGTGTTTGTTGTTTATAGACAAGCCTTTGCATCAGTTGCTCTCTCTCCCTTTGCTTTCTTTGACAGTAAGCAACCAGCTCCTTTGTCATGCAACTTGTTGTGCAAATTGTTCCTAGTTTCTCTTGTTGGGTTAACTCTGAGTTCAAACCTTTACTATGTTTCAATCAACTACACCACTGCAACATTTGCTGCAGCCTCCTCAAACACTGTCCCTGCCATTACCTTCATCATGGCTCTTTTAATTAGGGTGGAAACCATTTCCATAAAACGTGCACACGGTATAGCAAAGATTTTGGGGTCTATTCTAAGCCTTTCTGGGGCAATTACATTTGCTTTAGTGAAGGGACCTCCACTGAGTTTTATGAAATGGTATCAACAAAACCAGAACCAAACTCCTTCAACAGTTGTTCATTACAAAGTTGACATCATCAAAGGCCCTCTTATGATGCTCTTAGCAAACACTACATGGTCCTTGTGGCTTATCTTACAGGGATTTGTTGTGAAGCAGTACCCTGCAAAACTTCGTCTCACAGCTCTGCAATGCTTCTTCAGCTTCATGCAGTCTACTGTTGTGGCTGTTGCAGTTGAGAGGCACAATCCTTCGGCATGGAAGCTTGGATGGGATATTCATCTTCTTTCTGTGGCATACTGTGGTATAGTTGTAACAGGCATTTGTTATTGGCTGCAAGTCTGCACAATAGAAACTAAAGGCCCAGTTTTCACAGCAATGTTCACTCCTCTGGCTCTTATAATCACAGCAATATTCTCAGCATTATTGTGGAAAGAAACACTTTACTTGGGAAGTGTTGGTGGCACTATTTTACTAGTGGTTGGACTCTATAGTGTCCTATGGGGGAAGAGCAAGGAGAGTGTAAAAGTTGAAAACCTAGAACCTCAGCAAACAAAAGAGGAAACAAGATTGGAGTGCATTGTACAGCATTGA 1080 0.4148 MKSFLFRCVAIVEKNKPYVAMLFVQFVYAGMALLSKAAISKGMSPYVFVVYRQAFASVALSPFAFFDSKQPAPLSCNLLCKLFLVSLVGLTLSSNLYYVSINYTTATFAAASSNTVPAITFIMALLIRVETISIKRAHGIAKILGSILSLSGAITFALVKGPPLSFMKWYQQNQNQTPSTVVHYKVDIIKGPLMMLLANTTWSLWLILQGFVVKQYPAKLRLTALQCFFSFMQSTVVAVAVERHNPSAWKLGWDIHLLSVAYCGIVVTGICYWLQVCTIETKGPVFTAMFTPLALIITAIFSALLWKETLYLGSVGGTILLVVGLYSVLWGKSKESVKVENLEPQQTKEETRLECIVQH 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01846 359 PANTHER WAT1-RELATED PROTEIN 16 345 IPR030184 GO:0016020|GO:0022857
Viun4g01846 359 Pfam EamA-like transporter family 190 329 IPR000620 GO:0016020
Viun4g01846 359 Pfam EamA-like transporter family 17 150 IPR000620 GO:0016020
Viun4g01846 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 150 - -
Viun4g01846 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01846 Viun-Chr4 32890387 32895313 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01846 16 336 Nodulin-like Gene Family AT2G39510 39.815 2.49e-86 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01846 - - gmx:100800562 616.305