Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01842 ATGGCCGCTTCCACCATGGCTCTCTCTTCTCCATCACTGGCTGCTCAAGCCATACAGCTGTCCCCTTCCACCCCAGAGAGATTCGGTGGAAGGATTTCAATGAGGAAGACGACCTCCAAGTCGGTTTCTTCTAGAAGCCCATGGTACGACTCAGACATAAAGTACTTGGGTCCATTCTCCGACGAGGCCCCTTCATACCTAATAAGAGAATTCCCAGGTGACTATGGGTGGGACACCGCCGAACTTTCTACTGACCCAAAGACATTTGCAAAAAATCGTGAATTGGAAGTGAACCACTCTCGATGGGCGATGTTGGGGGCATTGGGAGAAGAACCTGGAGACGAACCTGGAGAAGAACCTGGAGAAGAACCTGAAGAAGAACCTGGAGTAAAACCTGGAGAAGAACCTGGAGAAGAACCTGGAGTAAAACCTGGAGAAGAACCTGGAGACGAACCGGGAGAAGAACCTGGAGAAGAACCTGAAGAAGAACCTGGAGTAAAACCTGGAGAAGAACCTGGAGATGAACCTGGAGAAGAATCTGGAGAAGAACCTGGAGTAAAACCTGGAGAAGAACCTGGAGACGAACCTGGAGAAGAACCTGGAGAAGAACCTGAAGAAGAAGCTGGAGTAAAACCTGGAGAAGAACCTAGAGACGAACTTGGAGAAGAACCTAGAGAAGAACCTAGAGACGAACCTGGAGAAGAACCTGGAGAAGACACTTTAAGTCCATGA 732 0.4918 MAASTMALSSPSLAAQAIQLSPSTPERFGGRISMRKTTSKSVSSRSPWYDSDXIKYLGPFSDEAPSYLIREFPGDYGWDTAELSTDPKTFAKNRELEVNHSRWAMLGALGEEPGDEPGEEPGEEPEEEPGVKPGEEPGEEPGVKPGEEPGDEPGEEPGEEPEEEPGVKPGEEPGDEPGEESGEEPGVKPGEEPGDEPGEEPGEEPEEEAGVKPGEEPRDELGEEPREEPRDEPGEEPGEDTLSP 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01842 244 SUPERFAMILY Chlorophyll a-b binding protein 47 110 - -
Viun4g01842 244 MobiDBLite consensus disorder prediction 127 151 - -
Viun4g01842 244 Pfam Chlorophyll A-B binding protein 65 110 IPR022796 -
Viun4g01842 244 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 110 IPR001344 GO:0009765|GO:0016020
Viun4g01842 244 MobiDBLite consensus disorder prediction 163 195 - -
Viun4g01842 244 MobiDBLite consensus disorder prediction 102 244 - -
Viun4g01842 244 MobiDBLite consensus disorder prediction 207 232 - -
Viun4g01842 244 Gene3D Chlorophyll a/b binding protein domain 55 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01842 Viun-Chr4 32842941 32844336 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01842 1 110 Chloroplast and Mitochondria Gene Families AT1G29930 70.536 2.91e-48 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01842 K08912 - vun:114181689 209.534