Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01825 ATGGCCGCTTCCACCATGGCTCTCTCTTCACCGTCACTGGGGTGTGTGTTCCCTGAACTGTTGGCCCGGAACGGTGTGAAGTTCGGGGAGGCGGTGTGGTTCAAGGCTGGGTCTCAGATATTCAGTGAGGGTGGGCTTGACTACTTGGGCAACCCAAGCCTGATCCATGCACAGAGCATCCTTGCCATCTGGGCCACACAGGTCATCTTGATGGGTGCAGTGGAGGGTTATCGCATTGCCGGTGGGCCTTTGGGTGAGGTCACTGACCCAATCTACCCGGGTGGGAGCTTCGACCCATTGGGCCTTGCTGAAGACCCAGAGGCTTTTGCTGAGTTGAAGGTGAAAGAGTTGAAGAATGGGAGATTGGCCATGTTCTCCATGTTTGGTTTCTTCGTTCAAGCCATTGTCACTGGCAAGGGTCCTTTGGAGAACCTCGTTGATCACCTTGCCGACCCCGTCAACAACAATGCCTGGGCCTATGCCACAAACTTTGTCCCCGGAAAGTGA 507 0.5523 MAASTMALSSPSLGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLVDHLADPVNNNAWAYATNFVPGK 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01825 168 Pfam Chlorophyll A-B binding protein 13 134 IPR022796 -
Viun4g01825 168 FunFam Chlorophyll a-b binding protein 3A, chloroplastic 51 161 - -
Viun4g01825 168 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 13 168 IPR001344 GO:0009765|GO:0016020
Viun4g01825 168 SUPERFAMILY Chlorophyll a-b binding protein 13 165 - -
Viun4g01825 168 Gene3D Chlorophyll a/b binding protein domain 2 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01825 Viun-Chr4 32463675 32464400 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01825 12 168 Chloroplast and Mitochondria Gene Families AT2G34430 92.405 1.16e-104 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01825 K08912 - gmx:547819 318.546