Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01822 ATGGCCGCTTCCACCATGGCTCTCTCTTCACCGTCATTGGCTGGTCAAGCCATCAAGCTCTCCCCTTCCACCCCGGAGCTCTCCGGTGGAAGGATTTCCATGAGGAAGACGGCCTCCAAGTCGGTTTCTTCCGGAAGCCCATGGTACGGCCCAGACCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGGCCCCTTCGTACCTGACGGGGGAATTCCCAGGTGACTATGGATGGGACACCGCTGGACTTTCTGCTGACCCGGAGACTTTCGCCAAAAACCGTGAACTGGAAGTGATCCATTCTCGATGGGCGATGTTGGGGGCATTGGGGTGTGTGTTCCCTGAACTGTTGGCCCGGAACGGTGTAAAGTTCGGGGAGGCGGTGTGGTTCAAGGCTGGATCTCAGATATTCAGTGAGGGTGGGCTTGACTACTTGGGCAACCCAAGCTTGATCCATGCACAGAGCATCCTTGCCATCTGGGCCACACAGGTCATCTTGATGGGTGCAGTGGAGGGTTACCGCATTGCCGGTGGGCCTTTGGGTGAGGTCACTGACCCAATCTACCCGGGTGGGAGCTTCGACCCATTGGGCCTTGCTGAAGACCCAGAGGCTTTTGCTGAGTTGAAGGTGAAAGAGTTGAAAAATGGGAGATTGGCCATGTTCTCCATGTTTGGTTTCTTCGTTCAAGCCATTGTCACTGGCAAGGGTCCTTTGGAGAACCTCGCCGATCACCTTGCCGACCCAGTGAACAACAACGCTTGGGCCTACGCCACCAACTTTGTCCCCGGAAAGTGA 795 0.5635 MAASTMALSSPSLAGQAIKLSPSTPELSGGRISMRKTASKSVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01822 264 FunFam Chlorophyll a-b binding protein, chloroplastic 55 257 - -
Viun4g01822 264 SUPERFAMILY Chlorophyll a-b binding protein 47 261 - -
Viun4g01822 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
Viun4g01822 264 MobiDBLite consensus disorder prediction 19 45 - -
Viun4g01822 264 Pfam Chlorophyll A-B binding protein 64 230 IPR022796 -
Viun4g01822 264 Gene3D Chlorophyll a/b binding protein domain 55 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01822 Viun-Chr4 32420816 32421870 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01822 1 264 Chloroplast and Mitochondria Gene Families AT2G34430 88.346 1.29e-172 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01822 K08912 - ccaj:109815895 528.48