Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01806 ATGGCTACTTCTTTGCACTCTTTCTTCTTCATTTCTTCCATTCTCTTCACTGCACTACATGTCTCCCAAACACAAGCCAAACCCTCACCAGTAAAGGGACTCTCATATTCTTTCTATTCCAAAACCTGTCCCAAACTTGAAACCATTGTCAGAAACCATCTCAAGAAGGTCTTCAAGAACGACAATGGCCAAGCTCCTGCCTTACTCCGCATTTTCTTCCATGATTGCTTTGTTCAGGGATGTGATGGGTCGGTGCTGCTAGATGGAAGCCCGGGTGAAAGAGACCAACCAGCAAACGGAGGAATAAGAAGTGAGGCTTTGGACACCATTGATGACCTCAGAGCTCTTCTTCATAAGGAGTGTGGAAGAATCGTTTCTTGCGCAGATATCACTGTCTTGGCAGCACGTGATGCTGTTTCTCTTACAGGAGGCCCTGATTATGCAGTGCCACTGGGAAGACGAGACGGTGTAAGCTTCAGCACATCAGGAACAAGTAACCTCCCCAAACCCTTCAACACCACCGGCGCGACGCTCGACGCTTTCGCCGCCAAAAGCTTCGACGCCACCGACGTGGTGGCCTTATCAGGCGCGCACACCTTTGGGCGTGCACACTGCAGCACCTTCTTCAACAGGCTCTCCCCTCTGGACCCCAACATGGACAAAACCCTAGCGAAGCAACTCCAATCCACGTGCCCAAATGCAGATTCCGGCAACACAGCCAACTTGGACATCAGAACTCCCACAGTGTTTGATAACAAATACTACCTCGATTTGATGAACCGTCAGGGAGTGTTCACCTCCGACCAGGACCTGTTGAGTGATAAGAGGACAAAAGGGTTGGTGAATGCTTTCGCTGTTAACCAAACCCTTTTCTTTGAGAAGTTTGTGGATGCTGCTGTGAGGCTGAGTCAGTTGGATGTGCTGACCGGAAACCAGGGTGAGATTCGTGCCAAATGCAACGTCGTGAATAGCAAGAAGTCTGTGTTGGAAGAGGTGCTGCAATTTGTTTATCAGTTTTGA 1020 0.4931 MATSLHSFFFISSILFTALHVSQTQAKPSPVKGLSYSFYSKTCPKLETIVRNHLKKVFKNDNGQAPALLRIFFHDCFVQGCDGSVLLDGSPGERDQPANGGIRSEALDTIDDLRALLHKECGRIVSCADITVLAARDAVSLTGGPDYAVPLGRRDGVSFSTSGTSNLPKPFNTTGATLDAFAAKSFDATDVVALSGAHTFGRAHCSTFFNRLSPLDPNMDKTLAKQLQSTCPNADSGNTANLDIRTPTVFDNKYYLDLMNRQGVFTSDQDLLSDKRTKGLVNAFAVNQTLFFEKFVDAAVRLSQLDVLTGNQGEIRAKCNVVNSKKSVLEEVLQFVYQF 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01806 339 SUPERFAMILY Heme-dependent peroxidases 33 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Viun4g01806 339 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Viun4g01806 339 ProSiteProfiles Plant heme peroxidase family profile. 33 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun4g01806 339 Gene3D - 38 320 - -
Viun4g01806 339 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g01806 339 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g01806 339 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g01806 339 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g01806 339 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g01806 339 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g01806 339 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g01806 339 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g01806 339 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g01806 339 Gene3D Peroxidase, domain 2 169 303 - -
Viun4g01806 339 Pfam Peroxidase 50 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun4g01806 339 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601
Viun4g01806 339 FunFam Peroxidase 168 302 - -
Viun4g01806 339 PANTHER - 18 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun4g01806 339 FunFam Peroxidase 37 179 - -
Viun4g01806 339 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun4g01806 339 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun4g01806 339 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun4g01806 339 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun4g01806 339 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun4g01806 339 CDD secretory_peroxidase 33 322 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01806 Viun-Chr4 32180997 32183791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01806 2 334 Peroxidase AT1G71695 51.873 2.82e-125 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01806 K00430 - gmx:547550 584.719