Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01782 ATGGAGTCACTCCAAACTCTTTCCCCTCTCACAGTTGCTCTTCTGGTTCTAATCCCGCCATTCCTCTACCTCTTCCTTGTGCTCCACCGCACCAGAAACAAAGAACCACCAACAATTCCCGGCGCGTGGCCGATCATCGGCCACCTCCCCCTGCTAGCGCGGTCCCCGGCCACCCACTACCTCCTGGGCGAGTTGGCGGACCGCCATGGCCCCATCTTCAGCATCAAGATAGGCACAGTGAAAACCGTAGTCATAAGCAACTGGGAAATGGCGAAAGAGTGCTTCACCACAAACGACGTCGCTGTGTCCTACCGCCCCTACCTTGTGGCCTGCCAAAACATGACCTACAACCTCGCCATGCTAGGATTCGCACCCTACGGCCAATTTTGGCGCGACATGAGGAAGAACGTGGCGTTCGTGTTCCTCGCAGACCACCGCATCGAGGCGCTCTCGCACGTGCGCATCTCCGAGGTGAGAACCTCGGCGAAAGAGCTTTACCACAAGTGGAGACGTGGGAAAACAGAGAAGGAGTTTTTCATGGTGGACATGACGCAGTGGCTGAAGGAGGTTGCGTTCAACATGGTGCTGAGGATGGTTGCCGGGAAGAGGTACTTCGGAGAAACCGCGGTGATCGAGGAGGAAGAAGCGCGGATTTGTTTGGCGGCGTTCAAAGAGTACATGCGGCTGTTGGGGGTGTTCGCCGTAGGGGACGCGGTGCCGTGGCTGAGGCGGTTCGATTTCGGAGGGCATGAGAAGGCCATGAAGGAGAATTTCAAGGAGCTGGATGCTGTGGTTGCGGAATGGTTGGAAGAACACAAGAGGAAAAGGAATTTGAACGCCGAGAAAGGTGACAAAGGTGAAGATTTCATGGAATTGATGCTCTCGGAGATCAATGGAACCAACATTCATGGCTTTGATTCTGATACTATCATCAAAGCCACCGCAATGGCATTGATTTTGGGAGGAACAGACACAAGCTCTGCTACTAACATCTGGACTCTGTCTTTGCTGCTGAACAATCCTCACACATTGAAGAAAGTGATGGAAGAAATTGACACTCACATTGGGAAAGAGAGACTTGTGACTGAGTCAGATATAAACAAGTTGGTGTACCTTCATGCAGTTGTTAAGGAATCGCTGAGGCTATATCCACCCACTCCTCTTAATGCGCCTCGTGAATTCAGAGAAGATTGCAAGCTTGGAGAATACCATGTGAAGAAAGGAACTCGTTTGATCACAAACTTGTGGAAGATCCAAACAGACCCTAGCATTTGGCCAGAGCCATTGGAGTTCAAGCCTGAGAGGTTCCTCACCACACACAAAGATGTGGATGTGAAGGGAAAACACTTTGAGCTCATTCCTTTTGGAAGTGGTAGGAGGGTATGCCCAGGAATAACCTTTGGGCTTAGAAGTTCTTATTTAACTTTGGCAAACTTTCTTCACTGCTTTGATGTCTCAAAAACCTCAAGTGAACCTATAGATATGACTGCAGCAGTGGAATTGACCAATGTTAGGGTTACTCCCCTTGAAGTTCTCATCAAACCTCGTTTGGCTCCTAGTCTTTATGAAACCATGTAA 1578 0.5006 MESLQTLSPLTVALLVLIPPFLYLFLVLHRTRNKEPPTIPGAWPIIGHLPLLARSPATHYLLGELADRHGPIFSIKIGTVKTVVISNWEMAKECFTTNDVAVSYRPYLVACQNMTYNLAMLGFAPYGQFWRDMRKNVAFVFLADHRIEALSHVRISEVRTSAKELYHKWRRGKTEKEFFMVDMTQWLKEVAFNMVLRMVAGKRYFGETAVIEEEEARICLAAFKEYMRLLGVFAVGDAVPWLRRFDFGGHEKAMKENFKELDAVVAEWLEEHKRKRNLNAEKGDKGEDFMELMLSEINGTNIHGFDSDTIIKATAMALILGGTDTSSATNIWTLSLLLNNPHTLKKVMEEIDTHIGKERLVTESDINKLVYLHAVVKESLRLYPPTPLNAPREFREDCKLGEYHVKKGTRLITNLWKIQTDPSIWPEPLEFKPERFLTTHKDVDVKGKHFELIPFGSGRRVCPGITFGLRSSYLTLANFLHCFDVSKTSSEPIDMTAAVELTNVRVTPLEVLIKPRLAPSLYETM 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01782 525 CDD CYP82 70 516 - -
Viun4g01782 525 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g01782 525 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g01782 525 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g01782 525 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g01782 525 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g01782 525 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g01782 525 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g01782 525 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g01782 525 PANTHER CYTOCHROME P450 82C3-RELATED 20 522 - -
Viun4g01782 525 SUPERFAMILY Cytochrome P450 37 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g01782 525 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g01782 525 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g01782 525 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g01782 525 Gene3D Cytochrome P450 29 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g01782 525 FunFam Cytochrome P450 82C4 28 514 - -
Viun4g01782 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Viun4g01782 525 Pfam Cytochrome P450 37 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01782 Viun-Chr4 31861987 31864044 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01782 6 522 Cytochrome P450 AT4G31940 45.992 1.70e-167 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01782 - - gmx:100802193 835.484