Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01695 AATCTTTACAAAGCTCTTTGTGACAAGGGAATTCACACTTTCATTGATGATGACAAGGTTGAGGGGGGAGAGAAAATAACACCAGCACTTATGAAGGCAATTCAAGAGTCTATGATTGCCATCACTGTGCTCTCTCACAACAATGCTTCTTCCTCCTTCTGCTTAGATGAACTTGCAGCCATTCTTGACTGCAAGAATAAAGGGCTACTTGTTATACCCGTATTTTATAAGGTAGACCCTTCATATGTGAGACACCAGAAAGGGAGTTATGGAGAAGCATTGACCAAGCAACAGAGATGGTTCAACGATAAGGAGAAGTTACGTTACATGCAGAAATGGAAGATGGCTTTGCGTCAAGTAGCTGACTTGTCTTGTTATCATTTCAAAGATGACATTGAATATGAATACAAGTTTATTGGGAGCATCGTTGAAAGGGTCTCTAGCGAAATTAATCGCGGTAGTTGTTTACATGTTGCAGATTACCCGGTTGGACTAGATTCACAAGTGCTTGAAGTTAGGAAGGTGTTAGAGGTTGGATGTTATGATGGTGTCCACATGATAGGCATCCACGGAATGGGTGGTGTAGGAAAATCAACACTTGCTCGAGCTGTTTATAATAGTTTAATTGCTGAGAATTTTGATAGTTTGTGTTTTCTTGAAGATGTTAGAGAAAAATCAAACAAACATGGTTTAGAACACCTCCAAAGCATCCTTATCTCACAAGTATTAGGAAAGGAGGAGATTAACTTAACAAGTAAGCAACAAGGAATTTCAATGATAAAGTGTAGGCTCAAGAGGAAAAAGATTCTATTGATTCTAGATGATGTTGACAATATCGAGCAATTACGAGCACTTGCTGGAGGATGTGATTGGTTCGGCCCTGGAAGCAGAATAATCATCACAACTCGGGATAAACAATTGTTAGCAACTCATCAAGTTACAAGAACATATGAGGTGAGGGAATTGAATGAGAAGGATGCTCTACGACTGCTTACATTGAAAGCTTTCAAAAAGGAAAAGGCTGATCCAGATTATGTGTTAGTCTTGAATCGTGTGGTAACTTATGCTTCTGGCCTTCCACTGGCACTAGAAGTAATAGGCTCCAACCTCTTTGGAAAAAGTGTAAAAGAATGGGAATCTGCTACCAGACAGTATAAGAGAATTCCTAAGAAAGAAATCATTGAGATACTTAAAGTAAGCTATGAAGCTTTGGAGGAAGAAGAGAAGGTTGTTTTTCTTGACATTGCTTGTTGCTTCAAAGGATATGCATTCAGAGAGGTAGAAGATATTCTTGGAGCTCTCTATGATGACTGCATGAAACATCATACTGGTGTGTTGGCTGAAAAATCTCTCATAAAGGTTAGTCTACTTAGTACAGTTGAAATGCACGATCTGATTGAGGACATGGGTAGAAAAATTGATCAGAAAGAATCACCGAATGAACCAGGGAAGCGCAGGAGATTATGGTTACCTAAAGATATAATCCAAGTTTTAAAATACAACATGGGAACAAGTAAAATTGAAATCATGTGTCTGGATTTCTCCATCTCTGAGAACGAAGAAACAGTAGAATTTGATGAAAACACCTTCATGGAGATGGACAACCTTAAAATACTTATCAATAGAAATGTTAAATCTTTCAAATGTCCCAATTACTTTCCACAAAGTTTGAAAGTACTGGAATGGCATCGATATCCTTCAAATTGTTTACCATCTAATTTTCATCCCAACAAACTTGTCATATGTAAGTTACCTGACAGTTGCTTTGAGTCATTTGGGATTCATGCTTCATCGAAGAAGTTCGAGAATCTGACAAGCTTGAATTTTGACGACTGCAAACTTCTAACACGAATACCAGATGTATCTGTTTCCTTTGAATGGTGTGAGAGTTTAACTGCAGTTCACGACTCAGTTGGTTTTATGACTAAACTTAAAATATTAAGTGCAGAAGGTTGCTCAAAGCTTACGAGTTTTCCATCTCTTCACTTGACTTCTCTTGAAAGACTAGAACTTTCATATTGTTCCAGTCTTGAAAATTTTCCTGAAATATTAGGAAATATGAAAAACATAAAAAGACTTGAACTGATTGATAACAAACTTCACGAGGCTGGAGGAACAGTGTTTATCTTTCCAGGAGGAAGTGTTCCAGAGTGGTTGGATAAAGAAAGCAAGGGACCTTCAATCTCTTTCTGGTTTCGAAATAAATTCCCTGTCAAAGTTCTTTGTCTTCTAATTGCACCTGTGCTGGGCCCTTTAGACTTGGCTATACCAATGGTGTCCATCAATGGAAAGATTAGAAAATATCTTTTTCATATGAATAAAGGAGTTAAGATTTTGGAATTGGACTATACACATCTCTTCGACATACGAGAGTTGAATTTCGAAGATGATCTTATGGGAGTGTCTACAGAATGGAAGCAAGTGGAGATCACCTATGAAGGGTTGTTTGATACCTCCGTCATTAAAGCAACAGGAATTCATGTAGTGAAAGAGGAAAGCATGAACGTGGAGGACATTCGATATGATGATCCTTGTACCAACAATAAAGAAGACAGTCATCTCAACACTTTCCAATCACAAAACTACTCCTAA 2592 0.3789 NLYKALCDKGIHTFIDDDKVEGGEKITPALMKAIQESMIAITVLSHNNASSSFCLDELAAILDCKNKGLLVIPVFYKVDPSYVRHQKGSYGEALTKQQRWFNDKEKLRYMQKWKMALRQVADLSCYHFKDDIEYEYKFIGSIVERVSSEINRGSCLHVADYPVGLDSQVLEVRKVLEVGCYDGVHMIGIHGMGGVGKSTLARAVYNSLIAENFDSLCFLEDVREKSNKHGLEHLQSILISQVLGKEEINLTSKQQGISMIKCRLKRKKILLILDDVDNIEQLRALAGGCDWFGPGSRIIITTRDKQLLATHQVTRTYEVRELNEKDALRLLTLKAFKKEKADPDYVLVLNRVVTYASGLPLALEVIGSNLFGKSVKEWESATRQYKRIPKKEIIEILKVSYEALEEEEKVVFLDIACCFKGYAFREVEDILGALYDDCMKHHTGVLAEKSLIKVSLLSTVEMHDLIEDMGRKIDQKESPNEPGKRRRLWLPKDIIQVLKYNMGTSKIEIMCLDFSISENEETVEFDENTFMEMDNLKILINRNVKSFKCPNYFPQSLKVLEWHRYPSNCLPSNFHPNKLVICKLPDSCFESFGIHASSKKFENLTSLNFDDCKLLTRIPDVSVSFEWCESLTAVHDSVGFMTKLKILSAEGCSKLTSFPSLHLTSLERLELSYCSSLENFPEILGNMKNIKRLELIDNKLHEAGGTVFIFPGGSVPEWLDKESKGPSISFWFRNKFPVKVLCLLIAPVLGPLDLAIPMVSINGKIRKYLFHMNKGVKILELDYTHLFDIRELNFEDDLMGVSTEWKQVEITYEGLFDTSVIKATGIHVVKEESMNVEDIRYDDPCTNNKEDSHLNTFQSQNYS 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01695 863 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 124 IPR035897 -
Viun4g01695 863 SUPERFAMILY L domain-like 525 702 - -
Viun4g01695 863 Gene3D - 321 405 IPR042197 -
Viun4g01695 863 Gene3D - 151 317 IPR027417 -
Viun4g01695 863 Pfam NB-ARC domain 172 402 IPR002182 GO:0043531
Viun4g01695 863 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 415 IPR027417 -
Viun4g01695 863 SMART till_3 1 123 IPR000157 GO:0007165
Viun4g01695 863 ProSiteProfiles TIR domain profile. 1 150 IPR000157 GO:0007165
Viun4g01695 863 Pfam TIR domain 1 148 IPR000157 GO:0007165
Viun4g01695 863 SUPERFAMILY "Winged helix" DNA-binding domain 391 499 IPR036390 -
Viun4g01695 863 Gene3D - 1 150 IPR035897 -
Viun4g01695 863 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 693 IPR044974 GO:0006952
Viun4g01695 863 Gene3D Ribonuclease Inhibitor 662 719 IPR032675 -
Viun4g01695 863 Gene3D Ribonuclease Inhibitor 511 661 IPR032675 -
Viun4g01695 863 PRINTS Disease resistance protein signature 661 677 - -
Viun4g01695 863 PRINTS Disease resistance protein signature 186 201 - -
Viun4g01695 863 PRINTS Disease resistance protein signature 263 277 - -
Viun4g01695 863 PRINTS Disease resistance protein signature 356 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01695 Viun-Chr4 30667107 30752988 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01695 1 690 WRKY Transcription Factor Family AT4G12020 29.109 2.47e-67 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01695 - - gmx:100817954 931.398