Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01680 ATGGAGGTGAGAAGCATTTGGATGAGACATGGATACAAACATTCTTATATGACCATAGAGACGGGAGGACCCTCCCAATATTGCAAACCAGCCGTCTTGCCTTTGCTGCTCCCCTCAACTCACACCATTCAAAGAGATAATTCCTTTCTCCTACTCCAAATGGACGTGAGATTTTCTTCCGCTCAGACTAAGAACTCCCAGGAGAATGTTGTGGCCAGTCCTCCAATTCAAATTGGGGGAAAATCTTGTCATCAGTGCCGGCAAAAGAAGGAAAACTTTCTTGCAATCTGCAAGAATTTAAAAAAAGGGAAGAATTGCCCTGTTAAGTTCTGCCACAAGTGCCTCTCGGCTAGGTACGGGGAGAATGCTGAAGAGGTCGCAGCGTTGGCTGATTGGATATGTCCAAAGTGTCGAGGTGTTTGCAACTGCAGTCTTTGCCAAAAGCGACGAGGTGAAGTGCCTACTGGTCAAATGTATCGCAGTGCCAAAGAATCTGGCTTTAAGTCAGTTGCAGAGATGTTAGCGTTTAAGAAGGCTTCAAAGGCATTAAATCCATCAAGCGATGGTAGTCTGAAAGAGGAGCGTGAAGTATTTTTTTCGGGGGAACTTGGAAAGGCAAGTTGCTCAGATGCAAATGATCTCACTGACGTTTGCAACAGAGATCATGGTGGTGATAATGTTGGTACCATCCTTCAAAGGTTCCCAAATGTTGGTATGAACCTAGAATGCAAAATAATTGAAGAGGAGGTTCTTTTACCACGTGGCATCGAGTTAAAAGAAATATATGGCATGGAGTTACAACCGAAAGATGTTGGGAATGCATTGCAGTTTCTGGAATTTTGTAGAGTGTTTGGAAAGGCTCTTGATCTCAAGGAAGAAGAAGCTAAAGCCATTTTTGAAGAATTGATAAGTGAAGAAAGTATGGATGAACATAACTCTTCACTGATTCAATTTCACATTAAACTTTTGGCATTGATCCTAAGTGATTCGGAAAAAGAGTCTCAGTCCTTACTTACGAAGAGTGAAACTAATTCATGGATAAAACATTTGGAGGGTTTAATGATGCAATCGCATCATATTCTAAATGATTTTCCTGTGAATTGGTTTCAAGAGGGCATAAGTGGATATTTTAAGTTGGATTTGTCTAAAAAGTTTAGACTAATGACTTTTCTCTGTGACGAAGTCTTGAACACAGAGAAACTGAGAAGATATATTCAAGACGAAAATACGAAACAAACAAAAAGAGTAAAAGAAGCGAAACTTAAGATTGCTGCAGCTAAAGAAAAGGTAAAGTGTCTTAGGCAGAGGTTGCGTAATGAGAAGGCCAAAGTGTCCCCATGTCCGATGGAGGAGTGTGATGCTCTTATAGACATAAGAACCCAAGTTGATGAAGCACACACTGATATGCTCAGCTTAAAGAGCACAAATCAAAAAGAAAGTGGAAGTGATGCCACGAGAATTAATCCAGAGTTCGTGGACAACAATGGGATGACCTTTTGGAACTTACGAAGTTACAATGAGGAGTCTGTTGTTTTGCGGCAAGATCTAAAAGTACAAGATGAAGCTGTTACATCACCTGAAGAAAGCTGGTTCGTTTATAGTCCTAAGGAGAAGGATGAGGTTGATAAATATATTTCTTCAAGGGCTAAAAGACGTAAGAACTCTCAAATAATAGCATGA 1680 0.4054 MEVRSIWMRHGYKHSYMTIETGGPSQYCKPAVLPLLLPSTHTIQRDNSFLLLQMDVRFSSAQTKNSQENVVASPPIQIGGKSCHQCRQKKENFLAICKNLKKGKNCPVKFCHKCLSARYGENAEEVAALADWICPKCRGVCNCSLCQKRRGEVPTGQMYRSAKESGFKSVAEMLAFKKASKALNPSSDGSLKEEREVFFSGELGKASCSDANDLTDVCNRDHGGDNVGTILQRFPNVGMNLECKIIEEEVLLPRGIELKEIYGMELQPKDVGNALQFLEFCRVFGKALDLKEEEAKAIFEELISEESMDEHNSSLIQFHIKLLALILSDSEKESQSLLTKSETNSWIKHLEGLMMQSHHILNDFPVNWFQEGISGYFKLDLSKKFRLMTFLCDEVLNTEKLRRYIQDENTKQTKRVKEAKLKIAAAKEKVKCLRQRLRNEKAKVSPCPMEECDALIDIRTQVDEAHTDMLSLKSTNQKESGSDATRINPEFVDNNGMTFWNLRSYNEESVVLRQDLKVQDEAVTSPEESWFVYSPKEKDEVDKYISSRAKRRKNSQIIA 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01680 559 ProSiteProfiles DDT domain profile. 268 332 IPR018501 -
Viun4g01680 559 SMART testlast3 268 332 IPR018501 -
Viun4g01680 559 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 80 174 IPR018866 -
Viun4g01680 559 PANTHER OS05G0300700 PROTEIN 78 454 IPR040221 GO:0006355
Viun4g01680 559 Coils Coil 409 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01680 Viun-Chr4 30521873 30531880 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Viun4g01680 zf-4CXXC_R1 1.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01680 - - vun:114181676 1121.3