Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01664 ATGTTCCTAAAAATCCAGTTTTTGTTCCTCACCCTTTTTCTGGCAGCCACCGTTGTTACCGCCATAGACCGGGGTTCCACTCTTTCAGCCTCTTCCACCTCCAACCAAACGTGGTCTTCTCCCAGTGGCACCTTCTCTCTGGGATTCATCTCCGTTCAGCCTCCCACCACCCCTCCTTCCTACATCGCCGCCATCTCCTACACCGGTGGCGACCCTGTTGTCTGGTCCGCCGGACACGGCGCAGCTGTGGACTCCGGTGGGTCCTTACAGTTCCTCTCCTCCGGCAACCTCCGCCTCGTCAACGGCTCCGGCGCCACCGTGTGGGAATCTGCCACGGCGGGCGCCACTTCAGCAGCCCTTGAGGACAGTGGCAATTTGGTGATTTCGAACGGCACAAGCACCGTCTGGTCAAGCTTTGAACACCCCACTGATACCCTGGTGCAGTCTCAGAATTTCAGTGTTGGTAAGGTTCTCACTTCTGAAAGCTACTTTTTTAGCCTCAGTGGAATTGGGAATTTGACTCTGAAGTGGAACAACAGCATAGAATACTGGACTCAGGGTTTGAATTCTTCCGTGAATATTAGTTTGGAGTCCCCTGTGTTGTCTTTGAATACGATTGGGCTTTTGGAACTTTCTGATGTGAACTTGGGTAGTAATCCTGTTCTTGTTGCCTATAGTAGTGACTATGATTTGAATGCTAACGTGTTTAGGGTGTTGAAGTTGGACAATGATGGGAATTTGAGGATTTATAGTACTAATCTAGGTGGTGGAACTTCTACTGTTAGATGGGCTGCTGTTGCAAATCAATGTGAGGTTTATTCTTACTGTGGGAACTATGGTGTGTGCAGTTACAATGATTCCAGCACGGTATGTGGTTGCCCTTCAGAGAATTTTGAGATGGTTGATCCGAATAATGGTAGGAAAGGGTGCAGGAGGAAGGTGAGTCTTGATAGTTGCCAAGGGAGCGCCACTATGTTGACCTTGGATCATGCTGTGGTGTTGAGTTATCCCCCTACATCGGAGACGTTTTTCATTGGTTTGTCAGCTTGTAGAACGAATTGTCTTTCGGGTTCAAGTGCCTGTTTTGCTTCTACTTCCTTGTCAGATGGCTCAGGGCAGTGTGTATTAAGATCAATAGATTTTGTTAGTGGATATCAAGATCCTTCGTTGCCCAGCACTTCTTATTTCAAGGTTTGTCCACCCTTGGCACCAAATCCACCATCCTCTTCGGCAGGGACTGTGAGGGAAAGGAGGTCCAAGGTGCCTGCATGGGTTGTGGTTGTGGTTGTTTTGGGTACCCTTTTGGTTTTGCTAGCCTTGGAAGGGGGTTTGTGGATGTGGTGTTGTAGGAATAACAAGAGGTTTAGTGGGTTGTCAGCTCAGTATGCTCTTCTTGAGTATGCTTCTGGTGCTCCGGTGCAGTTCTCGTACAGGGAGCTCCAGCAAGCTACAAAGGGGTTCAAGGAGAAGCTCGGAGCTGGTGGGTTTGGTGCTGTTTATAGAGGCACTCTTGTTAACAAAACTGTTGTTGCAGTGAAGCAACTTGAGGGCATTGAGCAAGGTGAGAAGCAGTTTAGGATGGAAGTTGCCACTATAAGTAGCACTCATCATCTGAATTTGGTGAGGCTTATTGGCTTTTGCTCCGAAGGGCGCCACCGGCTTCTGGTTTATGAGTTCATGAAAAATGGATCTCTTGATAATTTTCTGTTCCTGACAGAACAACATTCAGGAAAATTGTTGAATTGGGAGTACCGATACAACATTGCTCTTGGCACAGCAAGGGGCATCACATACCTACACGAGGAGTGCCGTGACTGCATAGTCCACTGTGACATAAAACCTGAAAACATTCTCTTGGATGAGAATTATGTTTCCAAAGTCTCTGATTTTGGCCTTGCAAAGCTTATCAATCCCAAGGACCATAGGCATCGGACCTTAACAAGTGTGAGAGGAACCAGAGGATACTTAGCTCCTGAGTGGCTTGCAAATCTTCCAATAACATCCAAATCTGATGTTTACAGCTTTGGTATGGTTTTGTTGGAGATTGTGAGTGGAAGGAGGAATTTTGATGTTTCAGATGAAACAAACAGGAAGAAGTTCTCCATCTGGGCCTATGAAGAGTTTGAGAGAGGTAACATCAGTGGAATTTTGGACAAAAGACTAGCTGCACATGAAGTTGATATGGAGCAAGTAAGAAGGGCAATTCAAGCAAGCTTTTGGTGCATCCAAGAGCAGCCATCTCAGAGACCAACAATGAGCAGAGTGCTGCAAATGCTAGAAGGAGTAACTGAGGTTGAAAAGCCACCTGCCCCAAAATCAGTGATTGAAGGAACTGTAAGTGGAACCAGCACATATCTGAGTAGCAATGCCAGTGCATTCTCCACTGTTGGAGTTTCACCCCCTGGACCCTCTTCTGCATCATCATTTCAGATTAGTGGTGTTTCAACCTTCAACTCAGGAAGGACCCCTGAGAAGGCAACCTCATCTCTTTTACAATCAGACACATGA 2508 0.4697 MFLKIQFLFLTLFLAATVVTAIDRGSTLSASSTSNQTWSSPSGTFSLGFISVQPPTTPPSYIAAISYTGGDPVVWSAGHGAAVDSGGSLQFLSSGNLRLVNGSGATVWESATAGATSAALEDSGNLVISNGTSTVWSSFEHPTDTLVQSQNFSVGKVLTSESYFFSLSGIGNLTLKWNNSIEYWTQGLNSSVNISLESPVLSLNTIGLLELSDVNLGSNPVLVAYSSDYDLNANVFRVLKLDNDGNLRIYSTNLGGGTSTVRWAAVANQCEVYSYCGNYGVCSYNDSSTVCGCPSENFEMVDPNNGRKGCRRKVSLDSCQGSATMLTLDHAVVLSYPPTSETFFIGLSACRTNCLSGSSACFASTSLSDGSGQCVLRSIDFVSGYQDPSLPSTSYFKVCPPLAPNPPSSSAGTVRERRSKVPAWVVVVVVLGTLLVLLALEGGLWMWCCRNNKRFSGLSAQYALLEYASGAPVQFSYRELQQATKGFKEKLGAGGFGAVYRGTLVNKTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNGSLDNFLFLTEQHSGKLLNWEYRYNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYVSKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSFGMVLLEIVSGRRNFDVSDETNRKKFSIWAYEEFERGNISGILDKRLAAHEVDMEQVRRAIQASFWCIQEQPSQRPTMSRVLQMLEGVTEVEKPPAPKSVIEGTVSGTSTYLSSNASAFSTVGVSPPGPSSASSFQISGVSTFNSGRTPEKATSSLLQSDT 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01664 835 Pfam D-mannose binding lectin 73 166 IPR001480 -
Viun4g01664 835 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 141 - -
Viun4g01664 835 Gene3D - 22 140 IPR036426 -
Viun4g01664 835 Gene3D Phosphorylase Kinase; domain 1 452 559 - -
Viun4g01664 835 Pfam Protein kinase domain 488 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun4g01664 835 Gene3D Transferase(Phosphotransferase) domain 1 560 773 - -
Viun4g01664 835 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 560 769 - -
Viun4g01664 835 ProSitePatterns Protein kinases ATP-binding region signature. 491 513 IPR017441 GO:0005524
Viun4g01664 835 ProSiteProfiles Bulb-type lectin domain profile. 143 262 IPR001480 -
Viun4g01664 835 ProSiteProfiles Protein kinase domain profile. 485 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun4g01664 835 FunFam S-receptor-like serine/threonine-protein kinase 457 559 - -
Viun4g01664 835 SUPERFAMILY Protein kinase-like (PK-like) 468 760 IPR011009 -
Viun4g01664 835 CDD STKc_IRAK 491 761 - -
Viun4g01664 835 PIRSF SRK 1 812 IPR024171 GO:0004674
Viun4g01664 835 SMART serkin_6 485 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun4g01664 835 Gene3D - 141 265 IPR036426 -
Viun4g01664 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Viun4g01664 835 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 142 265 - -
Viun4g01664 835 MobiDBLite consensus disorder prediction 793 835 - -
Viun4g01664 835 Pfam S-locus glycoprotein domain 232 294 IPR000858 GO:0048544
Viun4g01664 835 SMART blect_4 29 142 IPR001480 -
Viun4g01664 835 ProSiteProfiles Bulb-type lectin domain profile. 23 141 IPR001480 -
Viun4g01664 835 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 188 IPR036426 -
Viun4g01664 835 PANTHER OS07G0415500 PROTEIN 7 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01664 Viun-Chr4 30390976 30394039 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01664 458 769 Receptor kinase-like Gene Family AT5G20050 44.308 2.75e-80 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Viun4g01664 Pkinase 1.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01664 - - gmx:100795819 1360.13