Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01657 ATGGAGGCACCATCTCCGACCAAACCCATTGACCCAACAAAGCCTTCCATCACCACCCTCAGTGTGGAGGCCAGCCAGGCCGAGGCCAGCCCACTCCGAAAAATGTTTGCGGTGGCGTCCATAGCCGCGGGCATACAGTTCGGGTGGGCTCTTCAGCTCTCTCTGCTCACCCCTTACGTTCAGCTCTTGGGAGTTCCACACGCCGCAGCCTCCTTCATCTGGCTCTGCGGCCCCATCTCCGGGCTTGTGGTGCAGCCCATTGTGGGCTACTACAGCGACAGAAGCACTTCTCGCTTCGGTCGCAGACGCCCCTTTATTCTCGGCGGTGCAGTGGCTGTCGCCATAGCTGTGTTTCTTATCGGTTATGCAGCCGATATAGGGTACGCAGCCGGCGACGACATAACCAAAAAAACCCGTCCTCGGGCCGTTGGGGTGTTCGTCATAGGATTTTGGATCCTAGATGTCGCTAACAACATGTTACAAGGTCCTTGCCGTGCCTTTCTGGCTGACTTAGCCGCCGGCGACCAGAGAAAAACGAGAATGGCAAATGGGTTTTTCTCGTTCTTCATGGCGGTCGGCAACGTGTTGGGATACGCAGCGGGGTCTTTTAGTGCTCTGCACAAGATCTTCCCCTTCACGGAGACCAAGGCCTGCGATGTTTTCTGCGCCAATCTCAAAAGCTGTTTCTTTTTCTCGATCTTGCTGCTACTGTTCTTGTCCACGGTGGCTCTCATTTACGTAAAGGACAAGCCCGTGCCGCCACGGGCGGTGCAAGAGGACGCGCAGCCCTCGTGTTTCTTTCAGCTCTTCGGAGCGTTGAAGGAGCTGAAGAGACCCATGTGGATGCTCATGTTGGTGACAGCTATCAACTGGGTCGGCTGGTTCCCCTACTTCCTCTTCGACACCGACTGGATGGGTCGCGAGGTGTACGGCGGATCGGTGGGCGAGGACGCTTACGCGAAGGGGGTGCGCGTGGGGTCTCTGGGACTCCTGTTAAACGCCGTCGTTTTGGGGTTCATGTCGCTGGCTGTTGAACCGTTGGGGAAAATGGTTGGCGGAGTGAAGAGGCTTTGGGGCATCGTCAACTTCATTCTAGCGATTGGCTTCGGAATGACCATCGTCATAACCAAGGTGGCGGAGCACGAGCGCCACTTGAACCCCGCCGCCGTGGGCCACCCCTCCACCGGCGTCACAGTTGGGTCCATGGTTTTCTTCGCCGTTCTCGGAGTTCCCCTTGCGATTACTTTCAGTGTTCCGTTTGCTCTTGCATCAATATACTCAAGTGCTTCAGGAGCAGGACAAGGTTTATCATTGGGAGTCCTGAATCTGGCAATTGTGGTACCACAGATGGTGGTGTCTGCACTGAGTGGTCCTTGGGATGCTTTGTTTGGCGGCGGCAACTTGCCGGCTTTCATGGTGGGGGCGGCGGCGGCGGCGCTGAGCGCTATAATGGCGATTGTGTTGCTGCCAACTCCAAAACCAGCTGATGAAGCGAAGGCTGCAAGCATGGTTGGAGGGGGCTTTCACTAG 1530 0.566 MEAPSPTKPIDPTKPSITTLSVEASQAEASPLRKMFAVASIAAGIQFGWALQLSLLTPYVQLLGVPHAAASFIWLCGPISGLVVQPIVGYYSDRSTSRFGRRRPFILGGAVAVAIAVFLIGYAADIGYAAGDDITKKTRPRAVGVFVIGFWILDVANNMLQGPCRAFLADLAAGDQRKTRMANGFFSFFMAVGNVLGYAAGSFSALHKIFPFTETKACDVFCANLKSCFFFSILLLLFLSTVALIYVKDKPVPPRAVQEDAQPSCFFQLFGALKELKRPMWMLMLVTAINWVGWFPYFLFDTDWMGREVYGGSVGEDAYAKGVRVGSLGLLLNAVVLGFMSLAVEPLGKMVGGVKRLWGIVNFILAIGFGMTIVITKVAEHERHLNPAAVGHPSTGVTVGSMVFFAVLGVPLAITFSVPFALASIYSSASGAGQGLSLGVLNLAIVVPQMVVSALSGPWDALFGGGNLPAFMVGAAAAALSAIMAIVLLPTPKPADEAKAASMVGGGFH 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01657 509 FunFam Sucrose transport protein 29 489 - -
Viun4g01657 509 NCBIfam sucrose/proton symporter 31 493 IPR005989 GO:0005886|GO:0008515|GO:0015770
Viun4g01657 509 SUPERFAMILY MFS general substrate transporter 34 494 IPR036259 -
Viun4g01657 509 Gene3D MFS general substrate transporter like domains 29 489 IPR036259 -
Viun4g01657 509 Pfam MFS/sugar transport protein 35 294 - -
Viun4g01657 509 CDD MFS_SLC45_SUC 35 472 - -
Viun4g01657 509 PANTHER SUGAR TRANSPORTER 31 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01657 Viun-Chr4 30134480 30137583 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01657 16 509 Sucrose Transporter Gene Family AT1G22710 63.419 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01657 K15378 - gmx:100786411 901.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g01657 4 30134480 30137583 Viun7g03003 7 33020503 33023549 PCT