Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01652 ATGGAGGAGCAACCAAAAAGGAAACCTAGTCCCCTCCGAAAAATTGTGGCGGTGTCATCCATCGCCGCCGGTATCCAATTCGGATGGGCCCTACAACTCTCCCTTCTAACACCGTATGTACAAACCCTAGGTGTTCCTCACGCTTGGGCTTCCTTCATCTGGCTCTGTGGTCCTATCTCTGGCCTCCTAGTTCAACCCATTGTAGGATATAGTAGTGATCATTGTAAGTCTCCTTTCGGTCGTCGTCGTCCCTTTATCCTCGCCGGTGCACTTGCCGTTGCCGTCGCCATTATCCTTATTGGCTACGCCGCCGACATAGGACACTTAGCCGGCGATGACATCACCCAGAAAACCCGTCCACGCGCCGTCGCCATTTTCGTCATTGGCTTCTGGATCTTAGATGTTGCAAACAACATGCTCCAAGGTCCATGTCGCGCCTTCCTCGGAGACCTGGCTGCCGGTGATCAACAGAAGACGAGAATTGCAAACGCGCTCTTCTCTTTTTTCATGGCTGTCGGAAACGTCCTGGGCTATGCCGCAGGATCCTATGACAATCTCCACAAGATCTTCCCTTTCACAGAAACTGAGGCATGCAACGTCTTCTGCGCAAACTTAAAGAGTTGCTTTTTCTTCTCCATTATTCTTCTCCTTGCATTATGCATCATCGTTCTCGCTTGCGTGAATGATCCGCAGTTCACACCGCCATATGAGGAGACGAATGCTGAGGAGGCAGAGAACTCACACTTTTCATGCTTCTGCGGAGAGTTGTGCATTGCATTCAAGGGATTGAAAAAGCCAATGTGGATGCTGATGCTAGTGACAGCTGTTACCTGGATTGCGTGGTTCCTGTATGTGTTGTTCGACACTGACTGGATGGGTCGTGAGGTGTACGGCGGTGAAGTGGGAGAAAAGGCGTATAATGCTGGTGTGCATGCTGGTTCTTTGGGACTCATGTTGAATTCAGTGGTGTTGGCTGTGGCGTCCTTGGGTGTAGAACCTTTGGGTCGCTTGGTTGGGGGAGTGAAGTGGTTGTGGGCAATTGTTAATGTTATTCTCGCAGTGTGCATGGCAATGACTGTGCCCATTGCAAAAATCGCTCAGCATCAACGCGCCCTTAACCCTGCCCTCATTGGAAACCCTTCAATGGATGTGAAAGTTGGTGCCTTAGCCTTCTTCTGCGTCCTTGGTATTCCTTTGGCGGTTACGTATAGTGTTCCCTTTGCTCTAGCCTCTATCTATTCTAGCAACTCAGGAGCAGGACAAGGATTATCTCTGGGTCTTCTCAATGTTGCAATTGTGGTTCCTCAGATGATTGTATCTGCAATTAGTGGACCATGGGATGCTTGGTTTGGTGGTGGCAACTTGCCGGCGTTCGTGTTGGGTGCGGTGGCGGCCGCCATAAGTGCTATACTGGCAGTAGTTGTACTTCCAAACCCCAAGAAAAAAGATGAAGCCAGGATTCCTAGCCTCTCCATGGGAAGCTTCCATTAA 1491 0.5017 MEEQPKRKPSPLRKIVAVSSIAAGIQFGWALQLSLLTPYVQTLGVPHAWASFIWLCGPISGLLVQPIVGYSSDHCKSPFGRRRPFILAGALAVAVAIILIGYAADIGHLAGDDITQKTRPRAVAIFVIGFWILDVANNMLQGPCRAFLGDLAAGDQQKTRIANALFSFFMAVGNVLGYAAGSYDNLHKIFPFTETEACNVFCANLKSCFFFSIILLLALCIIVLACVNDPQFTPPYEETNAEEAENSHFSCFCGELCIAFKGLKKPMWMLMLVTAVTWIAWFLYVLFDTDWMGREVYGGEVGEKAYNAGVHAGSLGLMLNSVVLAVASLGVEPLGRLVGGVKWLWAIVNVILAVCMAMTVPIAKIAQHQRALNPALIGNPSMDVKVGALAFFCVLGIPLAVTYSVPFALASIYSSNSGAGQGLSLGLLNVAIVVPQMIVSAISGPWDAWFGGGNLPAFVLGAVAAAISAILAVVVLPNPKKKDEARIPSLSMGSFH 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01652 496 Pfam MFS/sugar transport protein 27 245 - -
Viun4g01652 496 CDD MFS_SLC45_SUC 15 472 - -
Viun4g01652 496 NCBIfam sucrose/proton symporter 11 481 IPR005989 GO:0005886|GO:0008515|GO:0015770
Viun4g01652 496 SUPERFAMILY MFS general substrate transporter 1 483 IPR036259 -
Viun4g01652 496 Gene3D MFS general substrate transporter like domains 8 478 IPR036259 -
Viun4g01652 496 PANTHER SUGAR TRANSPORTER 11 475 - -
Viun4g01652 496 FunFam Sucrose transport protein 9 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01652 Viun-Chr4 29995569 29997803 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01652 8 479 Sucrose Transporter Gene Family AT1G71890 63.732 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01652 K15378 - gmx:100785899 769.615