Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01650 ATGGAGGCATCATCTCTGACCAATCCCATTGACCCAAGAAAGCCTTCCATCACCACACTTAGTGTGAAGCAACTAAAACAACAACCGAGTCCCCTTCGAAAAATGGTGGCAGTGTCATCCATCGCCGCCGGTATCCAATTTGGATGGGCTCTACAACTATCCCTTCTCACACCATATGTTCAAACCCTAGGAGTTCCACACGTTTGGGCCTCCTTCATTTGGCTTTGTGGCCCTATCTCTGGCCTCGTAGTTCAACCCATTGTAGGTTACAGCAGTGACCGCTGCCAATCTCCCTTCGGTCGTCGTCGTCCATTTATCCTTGCCGGCGCAATAGCTGTTGCAGTCTCCATTTTCCTTATTGGTTATGCTTCTGATATAGGACACATGGCTGGCGATGACATCACAAAGAGAACTCGTCCACGAGCCGTTGCCATCTTTGTCACCGGCTTTTGGATCTTAGATGTTGCCAACAACATGCTCCAGGGACCATGTCGTGCCTTCCTAGGTGACTTAGCTGCCGGTGATTCGAGAAAAACGAGAACAGCTAATGCATTCTTCTCATTTTTCATGGCTGTCGGCAATGTCCTGGGCTATGCCGCAGGATCCTATAACGATCTCCACAAGATCTTCCCTTTCACTGAAACCGTGGCATGCAACATCTTTTGTGCAAACCTAAAAAGTTGCTTCTTTTTCTCTATCATTCTTCTTCTTGGTTTGTGTATTATCGTTCTCAGTTGCGTGGACGACCCTCAGTTCACACCGACACGTAAGGAGTTGAAAGAAGATGAGGCAAGGAAGACACAATCTTCGTGCTTCTCTGGGGAGTGTTGTGCTGCATTCAAGGGACTAGAGAAGCCAATGTGGATGTTGATGTTGGTGACTGCTATTAACTGGATTGCGTGGTTCCCTTATGTGTTGTTCGACACTGACTGGATGGGTCGTGAGGTGTATGGTGGTGACGTTGGGCAGAAGGCGTATGATGCTGGTGTGCAAGCTGGTTCTTTGGGCCTCATGTTGAATTCAGTGGTGTTGGCTGTGGTGTCCTTGGGTGTAGAACCCTTGGGTCGCTTGGTTGGTGGAACGAAATGGTTGTGGGCAATCGTAAATGTTATTCTCGCAGTTTGCATGGCAATGACCGTGCTCATCACAAAAATCGCTGAGCGACAACGTGCCAATAACCCTGCTCTCATTGGAAACCCCTCCATGGATGTGAAAATTGGATCCTTAGCATTCTTCTGCGTCCTTGGTATTCCTCTTGCGGTTACTTATAGTGTTCCATTTGCTCTAGCCTCTATCTACTCTAGTAGCTCAGGAGCAGGACAAGGATTGTCTTTGGGTCTTCTAAATATTGCAATTGTGATTCCTCAGATGATTGTTGCAGCAATCAGTGGACCATGGGATGCATTGTTTGGTGGTGGCAACTTGCCAGCATTCGTGTTGGGTGCCGTAGCAGCCGCCATAAGTGCCATATTGGCAGTTGTTCTACTTCCAAACACCAAGAAAGAAGATGAAGCCAACATTTCCAACCTCAAAATGGCTAGTTTTCATTAA 1551 0.4758 MEASSLTNPIDPRKPSITTLSVKQLKQQPSPLRKMVAVSSIAAGIQFGWALQLSLLTPYVQTLGVPHVWASFIWLCGPISGLVVQPIVGYSSDRCQSPFGRRRPFILAGAIAVAVSIFLIGYASDIGHMAGDDITKRTRPRAVAIFVTGFWILDVANNMLQGPCRAFLGDLAAGDSRKTRTANAFFSFFMAVGNVLGYAAGSYNDLHKIFPFTETVACNIFCANLKSCFFFSIILLLGLCIIVLSCVDDPQFTPTRKELKEDEARKTQSSCFSGECCAAFKGLEKPMWMLMLVTAINWIAWFPYVLFDTDWMGREVYGGDVGQKAYDAGVQAGSLGLMLNSVVLAVVSLGVEPLGRLVGGTKWLWAIVNVILAVCMAMTVLITKIAERQRANNPALIGNPSMDVKIGSLAFFCVLGIPLAVTYSVPFALASIYSSSSGAGQGLSLGLLNIAIVIPQMIVAAISGPWDALFGGGNLPAFVLGAVAAAISAILAVVLLPNTKKEDEANISNLKMASFH 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01650 516 Pfam MFS/sugar transport protein 47 298 - -
Viun4g01650 516 CDD MFS_SLC45_SUC 35 492 - -
Viun4g01650 516 FunFam Sucrose transport protein 29 496 - -
Viun4g01650 516 Gene3D MFS general substrate transporter like domains 26 502 IPR036259 -
Viun4g01650 516 PANTHER SUGAR TRANSPORTER 31 495 - -
Viun4g01650 516 NCBIfam sucrose/proton symporter 31 501 IPR005989 GO:0005886|GO:0008515|GO:0015770
Viun4g01650 516 SUPERFAMILY MFS general substrate transporter 33 503 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01650 Viun-Chr4 29905731 29977690 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01650 16 505 Sucrose Transporter Gene Family AT1G71890 63.030 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01650 K15378 - gmx:100785899 756.518