Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01649 ATGGAACCTCCTTCCTCTTCGCTTCAGGTTGAAACAGCAGTGCTGAAACAACCTAGTCCGTTCCGAAAAATGTTTGCTGTCTCTTCCATAGCTGCAGGGATCCAATTTGGGTGGGCCTTGCAACTCTCTCTCCTGACACCCTACGTTCAAACGTTGGGAGTCCCTCATGCGTGGTCCTCTTTCATCTGGCTCTGTGGCCCCATCTCTGGATTGGTTGTGCAGCCCATTGTAGGGTACACAAGCGATCGATGCACCTCCCGTTTCGGCCGTCGCCGTCCCTTCATTCTGAGTGGGGCGCTTGCCGTCGCCATCTCCGTGTTTCTTATTGGCTATGCGGCTGATATAGGACACGCCACCGGCGACGATATAACCAAAAAGACGCGTCCACGAGCGGTGGCCATCTTTGTGATCGGCTTTTGGATCCTGGATGTGGCTAACAACATGCTTCAGGGTCCATGCCGAGCTTTTCTCGGAGATCTCGCCGCCGGAGATCAGAAAAAAACCAGAACTGCCAATGCCTCTTACTCCTTCTTCATGGCCATCGGCAATGTTCTGGGTTACGCGGCCGGCTCCTATGATAAACTACACCACCTTTTCCCTTTTACGGAAACCAAGGCATGTAACGTGTTTTGTGCTAACCTGAAAAGTTGTTTTTTCTTTTCAATACTGCTCCTCCTGATCCTTTGTGTCGTTGTTCTCACATATGTGGAGGATCCACAGTTTATACCTGATGTTAATAACACTAACAATGCTGAAAATCAAGAGGTTCAAACTGGACTCTGGTATTCATGTTTTGGTGAATTGAGTGGTGCCTTTAAGGGACTAGAAAAGCCAATGTGGATGTTGATGCTTGTCACCGCCGTTAACTGGGTGGCATGGTTCCCTTATGTGTTATTTGATACCGATTGGATGGGTCGTGAGGTGTACGGTGGAGATGTGGGCACTGCTGCATATGATGCCGGAGTGCATGCAGGTTCTTTAGGACTTATGTTGAATTCAGTTGTTTTAGCAGTGATGTCAGTGGGTGTGGAGCCTTTGGGTCGTCTTGTCGGAGGAGTTAAATGGTTATGGGCAGGTGTTAATGTTATTCTCGCTGTTGGCCTGGCCATGACGTTGGTGATCACAAAGGCTGCACGCCATGAACGGAGATTTGACGGCGTCATTGCTGGTCATCCTTCAACAGCGGTTAAAGCTGGCGCATTGAGTTTCTTCTCCGTCCTCGGAATCCCTCAAGCGATAACTTTCAGCGTTCCCTTTGCTCTCGCATCTATATATTCCAGCACGTCAGGTGCAGGCCAAGGTTTATCTTTGGGTGTCCTCAATGTTTCAATCGTCGTGCCCCAGATGATAATATCAGCAATAAGTGGACAGTGGGATAAATGGTTTGGTGGTGGTAACCTGCCGGCATTTATGTTGGGTGCGGTGGCGGCCGCCGTGAGTGCAGTGTTAGCAGTTGTTCTGTTACCAACTCCAAAGCCAGCAGATGTGAGCAAAGCTTCCGTTCCTGTAGGGGGTTTCCATTAG 1524 0.4961 MEPPSSSLQVETAVLKQPSPFRKMFAVSSIAAGIQFGWALQLSLLTPYVQTLGVPHAWSSFIWLCGPISGLVVQPIVGYTSDRCTSRFGRRRPFILSGALAVAISVFLIGYAADIGHATGDDITKKTRPRAVAIFVIGFWILDVANNMLQGPCRAFLGDLAAGDQKKTRTANASYSFFMAIGNVLGYAAGSYDKLHHLFPFTETKACNVFCANLKSCFFFSILLLLILCVVVLTYVEDPQFIPDVNNTNNAENQEVQTGLWYSCFGELSGAFKGLEKPMWMLMLVTAVNWVAWFPYVLFDTDWMGREVYGGDVGTAAYDAGVHAGSLGLMLNSVVLAVMSVGVEPLGRLVGGVKWLWAGVNVILAVGLAMTLVITKAARHERRFDGVIAGHPSTAVKAGALSFFSVLGIPQAITFSVPFALASIYSSTSGAGQGLSLGVLNVSIVVPQMIISAISGQWDKWFGGGNLPAFMLGAVAAAVSAVLAVVLLPTPKPADVSKASVPVGGFH 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01649 507 CDD MFS_SLC45_SUC 24 472 - -
Viun4g01649 507 FunFam Sucrose transport protein 18 488 - -
Viun4g01649 507 Pfam MFS/sugar transport protein 25 190 - -
Viun4g01649 507 Gene3D MFS general substrate transporter like domains 17 488 IPR036259 -
Viun4g01649 507 PANTHER SUGAR TRANSPORTER 21 487 - -
Viun4g01649 507 NCBIfam sucrose/proton symporter 20 492 IPR005989 GO:0005886|GO:0008515|GO:0015770
Viun4g01649 507 SUPERFAMILY MFS general substrate transporter 22 493 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01649 Viun-Chr4 29897320 29899951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01649 5 507 Sucrose Transporter Gene Family AT1G22710 63.014 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01649 K15378 - gmx:100782007 798.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g01649 4 29897320 29899951 Viun4g01649 4 29897320 29899951 ECH