Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01598 ATGCTGTCAGTTATTCCTTTGAATTTCTCTGTATCTTCAACTCTCACCAAATTCTCACCTTTCAATATCACTTCTAAGAAACCAAACTCTTTCCCTTCCATGGTTTCACCTTCCTCCAATGGCTCCTCCCTCCTTTGTCTCTCCAACTCAGGAATTTGCAGGGCTAGTGAAGTTGCTGATTTGTTCCCAGCAGTGTCACCAGAAATTGTTGTCCGCGAGGCAAGGTTAGAAGACTACTGGGAAGTAGTAGAGACTCACTGCAAACGCTTCTTCCCTGAATATTCCTTCCCATTAGATTTTGTGCTCAGAATAGACAGATTGGTGATAGATATGTTATTAGCTATGTTAGCGGCTACATTATCTGGATTGTTTAAGCCAAGACACTGCAGAAAAATGTGTTTGGTGGCTGTTATTGGCACCCCACTTGATGAGTCCGTTTCATTTGGAACTGAGGGTCACAAGATTGGTTATTTTGATGGTAAATTCAGTCTCAACAAGGACTATGTGGTTGGTATATTAACAGTAGACAATATTGCAGACTTTCTACCAAGAAAAGGGCCACAGCGACATAGAAGGACTGGAATTGCATACATATCAAATCTGGCAGTTCGTGAAAATTTTAAGAGGAAGGGAATAGCTACAAAACTGGTGGAAAAGGCTGAGTCTCATGCCAGAAGTTGGAACTGTCGTGCTATGGCACTGCATTGTGACATAGAAAATCGTGTGGCCACAATGTTTTACAAAGGCCATGGCTACAAATGTGTTAAGGTTCCGGAAGGAGCAAAGTGGCCTGAACCAATGACCTCAACAGATATGAGATTCAACTTCATGATGAAACTTCTGAAAAATTCACCACCTTAG 861 0.4181 MLSVIPLNFSVSSTLTKFSPFNITSKKPNSFPSMVSPSSNGSSLLCLSNSGICRASEVADLFPAVSPEIVVREARLEDYWEVVETHCKRFFPEYSFPLDFVLRIDRLVIDMLLAMLAATLSGLFKPRHCRKMCLVAVIGTPLDESVSFGTEGHKIGYFDGKFSLNKDYVVGILTVDNIADFLPRKGPQRHRRTGIAYISNLAVRENFKRKGIATKLVEKAESHARSWNCRAMALHCDIENRVATMFYKGHGYKCVKVPEGAKWPEPMTSTDMRFNFMMKLLKNSPP 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01598 286 Gene3D - 64 271 - -
Viun4g01598 286 CDD NAT_SF 194 235 - -
Viun4g01598 286 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 66 281 IPR016181 -
Viun4g01598 286 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 284 - -
Viun4g01598 286 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 69 277 IPR000182 GO:0016747
Viun4g01598 286 Pfam Acetyltransferase (GNAT) family 167 252 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01598 Viun-Chr4 28771316 28773287 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Viun4g01598 Acetyltransf_1 4.4e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01598 - - var:108344314 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g01598 4 28771316 28773287 Viun7g02904 7 32290691 32292839 PCT