Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01595 ATGGAAATTAACATCACATCAAGAGAAACCATTAAACCATCAGTGCCAACTTCTGCAGAATGCAAAACCCTAAAATTATGCTTGTTTGATGTGTTTCAACTCAACACCTATTTTCCATTGATCCTTTTTTACAGCAAAACTAACAACCTTAAAGAATTCTCAGATGTCTCAACTCAGTTGAAGAAATCACTCTCTGAGGCACTAACAATTTTCTACCCTCTTGCAGGTAGAAGATGTGATTACTTTTCCATTGATTGCAACGATGCAGGTGCAATTTTCATGGAAGCTTCAGTGAACACCACCATGAAAGTGTTCTTAAAACCACCAAATCTAGAACTGCTAAACCAGTTACTTCCATGTGAGGCTAACAAGTGCCACCCTCACGAAGAAGTGTTGCCCCAGTTACTTGTTCAAGTAAACAAATTCCAATGTGGAGGAATAGCCATCGGGTTGTGCAACCTCCACATTCTCTTGGATGCATATTCTTGCAGTGTCTTCTTGAAAACCTGGTTTGCCATTTGCAAAGGGTCAAAGGAAGAAATCTCATGGCCAGATTTCTCTTCTGCTGCTTCTTCCTTCCCTCCAAGAAACACCACTGGTGTACGTGCTGGAATGTTGAATATAAACAAGGACTCGAACATAGAAGAAAACTGCACCACAAGAAGATTCTTGTTTGATGACAAAGCCATCAATGAGCTAAAATCCATGTCAACATGTGATGAAACAAAACCAACACGGTACGAGGTAGTATCTTCATTCATAAGCAAACATATGATTGTAGCAATGAAAGAGGACAAAACAAGACCAATGGTTGCATTGCATGTTGTGAACATGAGAAAAAGGATGGGGGAGCCTTTCTCAAGAGGTGCTGTTGGAAATTTGTTGTGGCCTGCATTGGTTGTTCTTGAGGGTGTGAACAAGAACACTGAGATCATAGATTTGGTTGAAATTCTAAAAGAAGGACTTGGAAAACTAACTAAGGATTTGTTTCTGAAACTGCAGAATGATCCTGGTTTTTTATGGAGTGATGAGTGTGCAGAACTAATGCTTGAAGGTATAGCAGCAAATAAACCAATCTCATTAGTGTTCACAAGTTGGGGTAATATGGGATTCAATGAAGTGGATTTTGGTTGTGGAAAACCTTTGTGGCTAGCTCAAAGAGGAGGTACTAAAGAAAGTATCCCAAACACAGTGATATTGATGGAAACAAGAGAGGGAATAGAGGCATGGATCACAATGCCAGAGAAACATATAAGTATTTTGGAACATGATGTGGACTTCCTTCTATTTGCATTGCTTAATCCTAGTATTTTAATCTAA 1320 0.3917 MEINITSRETIKPSVPTSAECKTLKLCLFDVFQLNTYFPLILFYSKTNNLKEFSDVSTQLKKSLSEALTIFYPLAGRRCDYFSIDCNDAGAIFMEASVNTTMKVFLKPPNLELLNQLLPCEANKCHPHEEVLPQLLVQVNKFQCGGIAIGLCNLHILLDAYSCSVFLKTWFAICKGSKEEISWPDFSSAASSFPPRNTTGVRAGMLNINKDSNIEENCTTRRFLFDDKAINELKSMSTCDETKPTRYEVVSSFISKHMIVAMKEDKTRPMVALHVVNMRKRMGEPFSRGAVGNLLWPALVVLEGVNKNTEIIDLVEILKEGLGKLTKDLFLKLQNDPGFLWSDECAELMLEGIAANKPISLVFTSWGNMGFNEVDFGCGKPLWLAQRGGTKESIPNTVILMETREGIEAWITMPEKHISILEHDVDFLLFALLNPSILI 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01595 439 Pfam Transferase family 1 427 - -
Viun4g01595 439 Gene3D - 215 430 IPR023213 -
Viun4g01595 439 PANTHER F21J9.9 4 431 - -
Viun4g01595 439 Gene3D - 1 202 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01595 Viun-Chr4 28722770 28724089 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01595 1 422 Monolignol Biosynthesis Gene Families AT5G48930 24.330 2.28e-20 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01595 - - vum:124842637 694.115