Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01533 ATGATATTTGAAACAGTCGACAAGGTTAAAGAGTTTTACAAGCAATACGCCATAAGATGTGGATTTGGTGTCCGTGTGAGAAGTTCAAGTAAAGGGGAAGACAACAAATTATGCTTTGTCAAATTGGTTTGTAGCTGTGAAGGAAACTACGTGTCCACCATCCCTCCGGAATTGAAAAGCCAACCAACAAAAACCAAGAATTATGGTGCACAGATAACAGTAGTTAAAAAGGGAGGTCAGTGGCACATAAAGAATGTCATACTTGATCACAATCATGACCTAAGCCCTATGAAGTCAAGAATGATTCGTGGCAACAAAAAATTGAACATACAAGTCAAGCGAACACTCGATATGAATGATGAAACAGGTGTGCGCATTAATAAAAGCTTCCAATCACTAGTTTGTGATGTTGGCAGATTTGAGAACCTTCCTTTTGTCAAGCGTGACGTTAGAAATTATATCGGACGACAAAGAAGGGCACTAGGGAAGGAAGGAGACGACCAAGCATTGATGGCACACTTCTCTCACATGAGACAAATGAACAACGACTTCTACTTTGAAATTAACTTCGATGATAACAATAGAATATCAAATGTATTTTGGGTTGACGTACGTAGTAGGGCAGCATGCGAGGAATTTGGAGATGTTGTCTCCTTTGACACAACATATTTAACCAACAAATATGATATGCCATTTGCACCATTTGTTGGAGTCAATCACCATGATAAGTCACCTGATGGCATTCTAACTGATCAGTGCAGGGCCATGCAAAATGCAATTGACATTGTTTTTCCAAATACTCCTCATGGGTGGTGCTTATGGCATTTAATGAAAAGTATTCATGAAAATTTACAAGGATATACTCATTACAAAACTATCAAAACCAAGTTGAAGACATTGGTTTACGAGTCCCTCAATGTGCACCAATTTGAGAGCGGGTGGCAACAATTAATGAATGATCACGACTTGGATAACAATGACTGGTTGGGCACACTATACGAAGAGAGAAAACGGTGGGTGCCTTGCTATTTGAAAGGAAATTTTTTGGCTGGTATGTCTACTACACAACGAAGTGAGGGACTCAATGCCTTCTTTGATGGATTTATCAATTCAATAACAACGTTACAGTAG 1131 0.3908 MIFETVDKVKEFYKQYAIRCGFGVRVRSSSKGEDNKLCFVKLVCSCEGNYVSTIPPELKSQPTKTKNYGAQITVVKKGGQWHIKNVILDHNHDLSPMKSRMIRGNKKLNIQVKRTLDMNDETGVRINKSFQSLVCDVGRFENLPFVKRDVRNYIGRQRRALGKEGDDQALMAHFSHMRQMNNDFYFEINFDDNNRISNVFWVDVRSRAACEEFGDVVSFDTTYLTNKYDMPFAPFVGVNHHDKSPDGILTDQCRAMQNAIDIVFPNTPHGWCLWHLMKSIHENLQGYTHYKTIKTKLKTLVYESLNVHQFESGWQQLMNDHDLDNNDWLGTLYEERKRWVPCYLKGNFLAGMSTTQRSEGLNAFFDGFINSITTLQ 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01533 376 Pfam FAR1 DNA-binding domain 11 95 IPR004330 -
Viun4g01533 376 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 376 IPR031052 GO:0006355
Viun4g01533 376 Pfam MULE transposase domain 243 278 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01533 Viun-Chr4 27472402 27473625 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun4g01533 FAR1 4.6e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01533 - - vun:114180665 790.415