Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01526 ATGCACATGCTGTCATCCTCTAACTGGAGTGACATCGCGCCTCCTCAACAAGACTTGTTGGACCTCCCTCCTCGTCTTTGTTATGATCGTTGGGTCTTCATTTCCAGTAAGATTAAACCTGGTTTGAGTGCTTATGCACAGAATCCACAACAGGCTGCTGAATCTTTGATTACTCTATTGGATAAAGCTGAGAGTGTTGTTCCTCGGGAGTTTCGGCCGAAGACACCTGTTAGAGTTGGGGCAACTGCAGGGTTGAGGGCTTTGGAAGGGGATGCTCCGGACAGGATTTTGCAAGCGGTTCGGGATTTGCTTAAGCAAAGAAGCACCCTAAAATCTGAGTCCGATTCAGTAAGAGTGCTGGATGGAACACAAGAAGGTGCTTTTCAATGGGTGACTATCAACTATCTACTGGGAAACCTAGGAAGAGATTATTCAGAGACAGTTGGGGTAGTTGATCTTGGTGGTGGATCTGTTCAGATGGCATATGCCATCTCAGAGACAGATGCTGCTGGGGCTCCAACTGTATCAGTTGGAGAGGACCAATATGTCAAGGAGATGTTCCTTAGGGGAAGGAAATATTACCTCTATGTTCACAGTTACTTGGGCTATGGTTTACTAGCAGCTCGTGCGAAGATTTTAAAGGTTTCGGATGATTTTGGAAACCCTTGCCTCTTAGATGGCTTTAATGGATCTTACAACTATGGAGGAAAGTCGTTTAATGCTTCATCCTATCCTTCTGGTGCAAGCTTGAATGAATGCAAAAGCATAGCTCTTAAGGCTCTCAAGGTTAACGAGTCAAAATGCACACATATGAAGTGCACTTTTGGTGGGATATGGAATGGTGGTGGGGGTGATGGACAGAAAAATCTTTTTGTTGCCTCATTTTTCTTTGACCGCGCAGCTGAGGCTGGTTTTGCCGACCCAAACTCACCCGTTGTGAAGGTTCGTCCTGTGGATTTCGAGGCTGCATCTAAGCAAGCTTGTCGAACAAAGATTGAAGATGTCAAATCCTTTTATCCACTTGTTGAGGAAGGGAACCGTCCATATTTATGCATGGATCTCTTGTACCAATATACATTGCTTGTTGAAGGATTCGGCCTAGATCCATGGCAACAGATGACGTTAGTGAAGAAAGTTAAATACCACGATGCTCTTGTTGAAGCTGCATGGCCCTTAGGCAGCGCCATAGAAGCTGTATCATCTACATAA 1209 0.4508 MHMLSSSNWSDIAPPQQDLLDLPPRLCYDRWVFISSKIKPGLSAYAQNPQQAAESLITLLDKAESVVPREFRPKTPVRVGATAGLRALEGDAPDRILQAVRDLLKQRSTLKSESDSVRVLDGTQEGAFQWVTINYLLGNLGRDYSETVGVVDLGGGSVQMAYAISETDAAGAPTVSVGEDQYVKEMFLRGRKYYLYVHSYLGYGLLAARAKILKVSDDFGNPCLLDGFNGSYNYGGKSFNASSYPSGASLNECKSIALKALKVNESKCTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEAGFADPNSPVVKVRPVDFEAASKQACRTKIEDVKSFYPLVEEGNRPYLCMDLLYQYTLLVEGFGLDPWQQMTLVKKVKYHDALVEAAWPLGSAIEAVSST 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01526 402 Pfam GDA1/CD39 (nucleoside phosphatase) family 36 401 IPR000407 GO:0016787
Viun4g01526 402 Gene3D Exopolyphosphatase. Domain 2 121 380 - -
Viun4g01526 402 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 120 135 IPR000407 GO:0016787
Viun4g01526 402 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 36 401 IPR000407 GO:0016787
Viun4g01526 402 FunFam Apyrase 1 121 380 - -
Viun4g01526 402 Gene3D - 37 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01526 Viun-Chr4 27353195 27357352 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01526 20 401 Calmodulin-binding Proteins AT3G04080 69.895 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01526 K14641 - gmx:100804818 651.358