Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01524 ATGACCTCGAGCTTTTCGTTCAGTCTTGTTCGGCAAAATATAAGCCACCTTCCACCACTGTTCACTTCCATAGTTATCTCCAATAACCACTGGATTTGGAGCATCTCTCTAAGCAATAGCCAACCCTGTCGGTCCAAAAGGCTGAATCTACTCAATGCGCCACCACACGCATACTCGTTGTTCACAGCATCTAGGTGTGTGACATGCACATGCTGTCATCCTCTAACTGGAGTGACATCGCGCCTCCTCAACAAGACTTGTTGGACCTCCCTCCTCGTCTTTGTTATGATCGTTGGGTCTTCATTTCCAGTAAGGTTGAAGATTAAACCTGGTTTGAGTGCTTATGCACAGAATCCACAACAGGCTGCTGAATCTTTGATTACTCTATTGGATAAAGCTGAGAGTGTTGTTCCTCGGGAGTTTCGGCCGAAGACACCTGTTAGAGTTGGGGCAACTGCAGGGTTGAGGGCTTTGGAAGGGGATGCTCCGGACAGGATTTTGCAAGCGGTTCGGGATTTGCTTAAGCAAAGAAGCACCCTAAAATCTGAGTCCGATTCAGTAAGAGTGCTGGATGGAACACAAGAAGGTGCTTTTCAATGGGTGACTATCAACTATCTACTGGGAAACCTAGGAAGAGATTATTCAGAGACAGTTGGGGTAGTTGATCTTGGTGGTGGATCTGTTCAGATGGCATATGCCATCTCAGAGACAGATGCTGCTGGGGCTCCAACTGTATCAGTTGGAGAGGACCAATATGTCAAGGAGATGTTCCTTAGGGGAAGGAAATATTACCTCTATGTTCACAGTTACTTGGGCTATGGTTTACTAGCAGCTCGTGCGAAGATTTTAAAGGTTTCGGATGATTTTGGAAACCCTTGCCTCTTAGATGGCTTTAATGGATCTTACAACTATGGAGGAAAGTCGTTTAATGCTTCATCCTATCCTTCTGGTGCAAGCTTGAATGAATGCAAAAGCATAGCTCTTAAGGCTCTCAAGGTTAACGAGTCAAAATGCACACATATGAAGTGCACTTTTGGTGGGATATGGAATGGTGGTGGGGGTGATGGACAGAAAAATCTTTTTGTTGCCTCATTTTTCTTTGACCGCGCAGCTGAGGTTCGTCCTGTGGATTTCGAGGCTGCATCTAAGCAAGCTTGTCGAACAAAGATTGAAGATGTCAAATCCTTTTATCCACTTGTTGAGGAAGGGAACCGTCCATATTTATGCATGGATCTCTTGTACCAATATACATTGCTTGTTGAAGGATTCGGCCTAGATCCATGGCAACAGATGACGTTAGTGAAGAAAGTTAAATACCACGATGCTCTTGTTGAAGCTGCATGGCCCTTAGGCAGCGCCATAGAAGCTGTATCATCTACATAA 1383 0.4505 MTSSFSFSLVRQNISHLPPLFTSIVISNNHWIWSISLSNSQPCRSKRLNLLNAPPHAYSLFTASRCVTCTCCHPLTGVTSRLLNKTCWTSLLVFVMIVGSSFPVRLKIKPGLSAYAQNPQQAAESLITLLDKAESVVPREFRPKTPVRVGATAGLRALEGDAPDRILQAVRDLLKQRSTLKSESDSVRVLDGTQEGAFQWVTINYLLGNLGRDYSETVGVVDLGGGSVQMAYAISETDAAGAPTVSVGEDQYVKEMFLRGRKYYLYVHSYLGYGLLAARAKILKVSDDFGNPCLLDGFNGSYNYGGKSFNASSYPSGASLNECKSIALKALKVNESKCTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEVRPVDFEAASKQACRTKIEDVKSFYPLVEEGNRPYLCMDLLYQYTLLVEGFGLDPWQQMTLVKKVKYHDALVEAAWPLGSAIEAVSST 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01524 460 Gene3D - 107 454 - -
Viun4g01524 460 FunFam Apyrase 1 191 438 - -
Viun4g01524 460 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 107 459 IPR000407 GO:0016787
Viun4g01524 460 Pfam GDA1/CD39 (nucleoside phosphatase) family 107 459 IPR000407 GO:0016787
Viun4g01524 460 Gene3D Exopolyphosphatase. Domain 2 191 438 - -
Viun4g01524 460 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 190 205 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01524 Viun-Chr4 27350540 27357352 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01524 106 459 Calmodulin-binding Proteins AT3G04080 69.399 8.41e-175 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01524 K14641 - gmx:100804818 625.165