Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01523 ATGACCTCGAGCTTTTCGTTCAGTCTTGTTCGGCAAAATATAAGCCACCTTCCACCACTGTTCACTTCCATAGTTATCTCCAATAACCACTGGATTTGGAGCATCTCTCTAAGCAATAGCCAACCCTGTCGGTCCAAAAGGCTGAATCTACTCAATGCGCCACCACACGCATACTCGTTGTTCACAGCATCTAGGTGTGTGACATGCACATGCTGTCATCCTCTAACTGGAGTGACATCGCGCCTCCTCAACAAGACTTGTTGGACCTCCCTCCTCGTCTTTGTTATGATCGTTGGGTCTTCATTTCCAGTAAGGTTGAAGATTAAACCTGGTTTGAGTGCTTATGCACAGAATCCACAACAGGCTGCTGAATCTTTGATTACTCTATTGGATAAAGCTGAGAGTGTTGTTCCTCGGGAGTTTCGGCCGAAGACACCTGTTAGAGTTGGGGCAACTGCAGGGTTGAGGGCTTTGGAAGGGGATGCTCCGGACAGGATTTTGCAAGCGGTTCGGGATTTGCTTAAGCAAAGAAGCACCCTAAAATCTGAGTCCGATTCAGTAAGAGTGCTGGATGGAACACAAGAAGGTGCTTTTCAATGGGTGACTATCAACTATCTACTGGGAAACCTAGGAAGAGATTATTCAGAGACAGTTGGGGTAGTTGATCTTGGTGGTGGATCTGTTCAGATGGCATATGCCATCTCAGAGACAGATGCTGCTGGGGCTCCAACTGTATCAGTTGGAGAGGACCAATATGTCAAGGAGATGTTCCTTAGGGGAAGGAAATATTACCTCTATGTTCACAGTTACTTGGGCTATGGTTTACTAGCAGCTCGTGCGAAGATTTTAAAGGTTTCGGATGATTTTGGAAACCCTTGCCTCTTAGATGGCTTTAATGGATCTTACAACTATGGAGGAAAGTCGTTTAATGCTTCATCCTATCCTTCTGGTGCAAGCTTGAATGAATGCAAAAGCATAGCTCTTAAGGCTCTCAAGGTTAACGAGTCAAAATGCACACATATGAAGTGCACTTTTGGTGGGATATGGAATGGTGGTGGGGGTGATGGACAGAAAAATCTTTTTGTTGCCTCATTTTTCTTTGACCGCGCAGCTGAGGCTGGTTTTGCCGACCCAAACTCACCCGTTGTGAAGGTTCGTCCTGTGGATTTCGAGGCTGCATCTAAGCAAGCTTGTCGAACAAAGATTGAAGATGTCAAATCCTTTTATCCACTTGTTGAGGAAGGGAACCGTCCATATTTATGCATGGATCTCTTGTACCAATATACATTGCTTGTTGAAGGATTCGGCCTAGATCCATGGCAACAGATGACGTTAGTGAAGAAAGTTAAATACCACGATGCTCTTGTTGAAGCTGCATGGCCCTTAGGCAGCGCCATAGAAGCTGTATCATCTACATAA 1419 0.4531 MTSSFSFSLVRQNISHLPPLFTSIVISNNHWIWSISLSNSQPCRSKRLNLLNAPPHAYSLFTASRCVTCTCCHPLTGVTSRLLNKTCWTSLLVFVMIVGSSFPVRLKIKPGLSAYAQNPQQAAESLITLLDKAESVVPREFRPKTPVRVGATAGLRALEGDAPDRILQAVRDLLKQRSTLKSESDSVRVLDGTQEGAFQWVTINYLLGNLGRDYSETVGVVDLGGGSVQMAYAISETDAAGAPTVSVGEDQYVKEMFLRGRKYYLYVHSYLGYGLLAARAKILKVSDDFGNPCLLDGFNGSYNYGGKSFNASSYPSGASLNECKSIALKALKVNESKCTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEAGFADPNSPVVKVRPVDFEAASKQACRTKIEDVKSFYPLVEEGNRPYLCMDLLYQYTLLVEGFGLDPWQQMTLVKKVKYHDALVEAAWPLGSAIEAVSST 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01523 472 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 107 471 IPR000407 GO:0016787
Viun4g01523 472 Gene3D Exopolyphosphatase. Domain 2 191 450 - -
Viun4g01523 472 Gene3D - 107 466 - -
Viun4g01523 472 FunFam Apyrase 1 191 450 - -
Viun4g01523 472 Pfam GDA1/CD39 (nucleoside phosphatase) family 107 471 IPR000407 GO:0016787
Viun4g01523 472 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 190 205 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01523 Viun-Chr4 27350540 27357352 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01523 106 471 Calmodulin-binding Proteins AT3G04080 71.585 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01523 K14641 - gmx:100804818 654.055