Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01517 ATGGGAGCTGCTTATGACCACGATTCTCCTCCTCTACTTGAAGACCTTAAGGTGACCATACACAACTCCTCCATGATTTTCCCATCGAAAGAGATCGAGAGAAAGTCCTTGTTCTTGTCCAACATAGACAAGGTCCTCACCTTCGATGTCGAAACGGTTCACTTTTTCGGTGCCAACAAAGATTTTCCTCCGCATGTTGTCACTGAGAGGCTGAAGAACGCCGTAGAGGATGCCCTTGTTGTTTATGACTTCTTGGGTGGAAGATTGAAGGTAAACCCTGAAACCAAAAGGTTAGAGATGGATTGTACTCCAGAAGGGGCAGGGTTTGTGGAAGCTTCCAGTGAGTACAAACTGGAGCAGATAGGGGATTTGGATTATCCAAACACAGCCTTTGCACAGTTGGTGCACAAGAACAAGAACTTTCTTAAAGAGGGTGATGTTCCACTCTGTGTTGCCCAGGTGACATCGTTCAAGTGCGGTGGCTTTGCAATTGGCTTTTCAACAAGCCACACGACCTTCGACGGTCTCAGCTTCAAGACCTTCCTCGACAACATCGCTTCCATAGCCGCTAAAAAGCCCTTGGCCGTGACGCCGTGCCACGACAGGCACCTGCTGGCCGCCCGATCCCCGCCACGTGTGACCTTCCCACACCCGGAGATGCTGAAGCTGAACGACCTCCCCACCAAGTCCAACATCTTCGACGCCTCAACCGAGCAGCTTCAATTCAAGGTCTTCAAACTAACCTCAAACGACATCACGAAGCTGAAGGAAGAGGCGCGAAATTCAGTTGGCGGTGACAAAACCACACGCGTCACAGGCTTTAACGCTATCACGGCCCACATATGGAGATGCAAGGCACTGTCAAGCGACGACGACGATAGTAACCGTAATAGGTCATCGACGATTCTGTACGCTGTGGATATACGTTCGAGGTTGGAGCCTCCGTTGCCGAAATCTTACACCGGCAACGCAGTGTTAACGGCATATGCGACTGCCACGTGTCGGGAGGTGGAAGAATGGCCGTTCATGAGGTTGGTGGAAACGGTGCGTGAGGGTGCGACTAGGATGACGAATGAGTACGCAAGGTCGATCATTGACTGGGGAGAGATGAACGAAGGGTTTCCTAATGGGGAGGTTTTGGTGTCGTCGTGGTGGAGATTAGGGTTTGAGGAGGTGGAGTATCCATGGGGGAAGCCTAAGTATTGTTGCCCTGTGGTGTATCATCGGAAGGATATTGTTCTGTTGTTTCCTCCGGTTGACGGAGGAGGTGATGGGGTCAGTATTATCGTGGCTCTTCCTCCCAAGGAGATGAACAAATTCGATGGACTCTTCAATAAGTTTTTGGGTGTTTGA 1353 0.5055 MGAAYDHDSPPLLEDLKVTIHNSSMIFPSKEIERKSLFLSNIDKVLTFDVETVHFFGANKDFPPHVVTERLKNAVEDALVVYDFLGGRLKVNPETKRLEMDCTPEGAGFVEASSEYKLEQIGDLDYPNTAFAQLVHKNKNFLKEGDVPLCVAQVTSFKCGGFAIGFSTSHTTFDGLSFKTFLDNIASIAAKKPLAVTPCHDRHLLAARSPPRVTFPHPEMLKLNDLPTKSNIFDASTEQLQFKVFKLTSNDITKLKEEARNSVGGDKTTRVTGFNAITAHIWRCKALSSDDDDSNRNRSSTILYAVDIRSRLEPPLPKSYTGNAVLTAYATATCREVEEWPFMRLVETVREGATRMTNEYARSIIDWGEMNEGFPNGEVLVSSWWRLGFEEVEYPWGKPKYCCPVVYHRKDIVLLFPPVDGGGDGVSIIVALPPKEMNKFDGLFNKFLGV 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01517 450 Gene3D - 226 447 IPR023213 -
Viun4g01517 450 Pfam Transferase family 16 441 - -
Viun4g01517 450 Gene3D - 14 221 IPR023213 -
Viun4g01517 450 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 24 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01517 Viun-Chr4 27062661 27067328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01517 16 448 Monolignol Biosynthesis Gene Families AT5G48930 29.801 1.07e-51 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01517 K13065 - gmx:100305576 763.837