LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun4g01493	ATGGCTTTGTTATATTATGGTTTCCTCGTTGTGCTTTTTCTCTATTCTCTTAAGGTCTTGTTCCGATCACGGAAATTCAGAAACCTTCCCCCAGGGCCTCTGGCTTACCCTATAGTAGGAAACCTTTTGCAACTTGAACAACCTTTTCACCGTTTTTTCACTCGCTTGTCAAAAAAACATGGCAAAATCTTCTCTCTCTGGTTCGGCAACCGTCTCGTTATCGTTGCTTCTGACCTACCCGTGGTGCAGGAATGCTTCTCCAAATACGACACCGTGTTGGCCAACCGACCCCACTTTCTCCTCGGCAAACACATCAGTTACAACAACAGCACCATCCTTCACTCCTGTTACGGTGAACATTGGCGCCATCTCCGCCGCATCTTGTCCCTCGAGGTTGTCTCAACGCACCGTTTGAATGCCTCCTACGAAATCCGAAGGGACGAGCTCACCAAACTCTTGCAGAGACTCGCTCGCACCTCGCGCAACGACTTCACTCAAGTGGATCTCAAAAGCATGGTTATGGAAACGTCGCTCAATACTATGATGAGGCTGGTGTCCGGGAAGAGATTCTACGGTGATGACTGTGATGTGAGTGATGTGGAGAAGGCGAGAGAATTCAGAGGTATCCTGAGAGAGATGGTGTCATTGGCAGGAGTAAACAACCGTGGAGACTTCTTGCCTTTCATGAGGTGGTTTGATTTGGATAATTTGGAGAAGAGGCTCAAGAACATTGGGAAGAGAATCGATACATTCTTGCAATCTATCGTTGATGAACTTCGTGCTTCAAATAAGACTACCAATACTATGATATCTCAGCTCTTGGTTCAACAAAAATCACAACCCGAACAGTACAGCGATCAAATCATCAAGGGACTTTGCATGAGCATGTTACTTGCAGGAACAGACACATCAGCTTTGACTTTGGAATGGGCAATGGCTAATCTATTGAACCATCCAGAAGTTTTAAAGAGGGCTAAAGAAGAGTTAGACGCTCATGTGGGATCAGATCGTCTGGTGGATGAATCAGACATGTCAAAACTTCCTTACATTCTTAACATATTTTTCGAGACAATAAGATTGCATCCTGCTGCTCCACTTTGGTCTCCACATATGTCTTCTGAAGATTGCACCATCGGAGGATATAATCTCCCGAAAAACACGATTCTGTTGGTGAATGCTTGGTCGATTCATCACGATCCAACTTTGTGGAAGAACCCAACAGAATTTAGGCCCGAAAGGTTCGAGAAGGAATGTGAATCAAGCAGTTTGCTTTCATTTGGAATAGGGAGGAGGTCTTGCCCTGGAAACATGTTGGCTCAACGCACTGTGGGTTTAGCTTTGGCTTCATTGATTCAGTGTTTTGAGTGGCAACGAATTGGTAAGGGAGAAATTGATATGACCGAAGCAAAGGGAATCACTATATCAAGGCAAAATCCATTGGATGTTATGTGCAAAGCTCGTCAAATCCCAGCTGTTATGGATCTATATTGA	1491	0.4474	MALLYYGFLVVLFLYSLKVLFRSRKFRNLPPGPLAYPIVGNLLQLEQPFHRFFTRLSKKHGKIFSLWFGNRLVIVASDLPVVQECFSKYDTVLANRPHFLLGKHISYNNSTILHSCYGEHWRHLRRILSLEVVSTHRLNASYEIRRDELTKLLQRLARTSRNDFTQVDLKSMVMETSLNTMMRLVSGKRFYGDDCDVSDVEKAREFRGILREMVSLAGVNNRGDFLPFMRWFDLDNLEKRLKNIGKRIDTFLQSIVDELRASNKTTNTMISQLLVQQKSQPEQYSDQIIKGLCMSMLLAGTDTSALTLEWAMANLLNHPEVLKRAKEELDAHVGSDRLVDESDMSKLPYILNIFFETIRLHPAAPLWSPHMSSEDCTIGGYNLPKNTILLVNAWSIHHDPTLWKNPTEFRPERFEKECESSSLLSFGIGRRSCPGNMLAQRTVGLALASLIQCFEWQRIGKGEIDMTEAKGITISRQNPLDVMCKARQIPAVMDLY	496

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun4g01493	496	PRINTS	P450 superfamily signature	299	316	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Viun4g01493	496	PRINTS	P450 superfamily signature	352	363	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Viun4g01493	496	PRINTS	P450 superfamily signature	424	433	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Viun4g01493	496	PRINTS	P450 superfamily signature	433	444	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Viun4g01493	496	Coils	Coil	234	254	-	-
	Viun4g01493	496	PRINTS	E-class P450 group I signature	57	76	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Viun4g01493	496	PRINTS	E-class P450 group I signature	351	369	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Viun4g01493	496	PRINTS	E-class P450 group I signature	392	416	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Viun4g01493	496	PRINTS	E-class P450 group I signature	433	456	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Viun4g01493	496	PRINTS	E-class P450 group I signature	81	102	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun4g01493	Viun-Chr4	26297514	26299514	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Viun4g01493	8	496	Cytochrome P450	AT4G37370	48.780	3.69e-180	513

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun4g01493	K13260		-	gmx:100811727	660.218

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