Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01485 ATGGGCAGCATGGAGAAAGATGAAGAGGAGGAAGATGCAGACATAAAGTTCTCAAAGAGAGTGATGATATTGATCTCAAAATCAAATCAAGGAAGTATACCAAAGTCTTCTGTCATCGATGCTGAGCGTGAGAGCAGCAAAGAGTTTGGTCCAATTTGGTTCTTCTTGATTGGTGCAGAAGAGAACAAAGGAATTGTACCATTGTCACAACTATCTTCTTGCTTTCTACGGCTCAAGGATGGCAGTGTAACTGTTTCCTTTATTAAAAGGCATACCGTGAGAAGAAGCTGTAGTGAAACTGAGGTGGAGATAAGATTACAAGGGAGGCCAGTTTTATCTTCATGGAAACTGAACAGCTTAGTAGAAATGTGGGTGCAAACATTGCCAAAGAATGAGACTCTTGTTGTTTAG 411 0.4063 MGSMEKDEEEEDADIKFSKRVMILISKSNQGSIPKSSVIDAERESSKEFGPIWFFLIGAEENKGIVPLSQLSSCFLRLKDGSVTVSFIKRHTVRRSCSETEVEIRLQGRPVLSSWKLNSLVEMWVQTLPKNETLVV 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01485 136 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 28 133 IPR044807 GO:0004842
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01485 Viun-Chr4 25822615 25823829 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01485 68 129 C3H Transcription Factor Family AT3G23060 42.188 1.36e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01485 K16277 - vun:114180323 256.914