Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01473 ATGGTTGGATATCTTCGAAATATTCTTGTGGAGTTGGTGAACAACCCATCTGAAGATATTATTAAAGCTATCGATGATAACATCGACGAAGAAGTTCTTCAAGTTGGCATGAGTTTTGAAAATGTAGACGAACTGAAGCAATTCTATAAGAAATACATTATTAAATGTGGGTTCGGTGTCAGAATTAGAAGTTCATCAAAAGAAGAAGACAACGAGTTATGCTTCATAAAGTTAGTTTGCAGTCGTAAAGAGAAGTGTCACTCCGCAATTCCTTCAGAACTAAAAAGTCTCCAAACACAGAGAAAACAATGTCCTGCCAGAATTAGCGGGGTGAAAAAGGAAGGGCAGTGGTATATACGCAATGTTAACAATGTCTATAACCACGACCTTAGTCTAAAAAAGTCCAGGTTGATACGTGGAGACAAAATTGTAACCATGCAGGTCAAGAGGACACTAGATATGACTGATGAAGCCGGTGTGCGCATTAACAAGAGTTTCCAGTCATTAGTTTGTGAAACAGGTGGCTTTGAAAATGTTTCGTTTGTTGAGCGTGATGTCAAAAATTACATCGGAAAGCAACGCAGGAGATTGTGCAAGGATGGTGATGCACAAGCTTTGATAACACACTTCTCAAACATGCAACAATTGAACCATGACTTCTACTATGACATTGACTTGGATTCAGATGATCGCATCTCAAACGTTTTTTGGGTTGATGCGCGTAGCCGTGCAACATGCGAAGAATTTGGAGATGTTATATCATTCGACACAACTTATTTGACCAACAAGTATGACATGCCATTTGCACCATTTGTCGGTGTTAATCACCATGGCCAGTCAATATTATTAGGATGTGGATTGTTGTCATCAGAAGATACATCCATCTTTGTCTGGCTATTTCAGAGTTGGCGTCGATGCATGTCTAATAAGTCACCTGAGGGAATTGTCACGGATCAATGCAAAGCTATGCAAAACGCAATTGAAATTGTTTTTTCAAATACAAGGCATAGATGGTGCCTTTGA 1023 0.392 MVGYLRNILVELVNNPSEDIIKAIDDNIDEEVLQVGMSFENVDELKQFYKKYIIKCGFGVRIRSSSKEEDNELCFIKLVCSRKEKCHSAIPSELKSLQTQRKQCPARISGVKKEGQWYIRNVNNVYNHDLSLKKSRLIRGDKIVTMQVKRTLDMTDEAGVRINKSFQSLVCETGGFENVSFVERDVKNYIGKQRRRLCKDGDAQALITHFSNMQQLNHDFYYDIDLDSDDRISNVFWVDARSRATCEEFGDVISFDTTYLTNKYDMPFAPFVGVNHHGQSILLGCGLLSSEDTSIFVWLFQSWRRCMSNKSPEGIVTDQCKAMQNAIEIVFSNTRHRWCL 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01473 340 PANTHER OS01G0519700 PROTEIN 27 340 - -
Viun4g01473 340 Pfam FAR1 DNA-binding domain 47 130 IPR004330 -
Viun4g01473 340 Pfam MULE transposase domain 252 340 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01473 Viun-Chr4 25564135 25565645 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun4g01473 MULE 6e-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01473 - - vun:114180824 430.254