Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01443 ATGTCTTTCCGTCGTGTTGACTTTGAGTATATAAAACCCGCGAAACCCAAAAAAGGTTTCGTTGTAAAATCAGAACAACTACCAGACACGCTTCAAAATCTTATTTCTCTCTTCCAACAAAGTAAACTCTCTCTCTCTCACACAGTGTCATTGAATTTATCTGTACCTGCCACTGTTTCACCCTTGATGGCTCCCTCAGACTCTGAAACTTTGGGGCGCCATTCTCTGATTCCGACCTTTCTCTATTCCTGTCCCTCTCCGCAGCAAAAGATGGAGGCTTCAAGCTTCGTGGTTCGTTCTCCGAGTGAGAAACGCAGCATAGAGATGTTTTCGCCGGCGTTCTACGGTGCTTGCGCCATCGGAGGAACTCTCAGCTGTGGCGTCACGCACACAGCCGTCACGCCTCTTGACGTTGTCAAATGCAACATACAGATAGACCCAGTCAAGTACAAGAACACGAGCACAGGATTTGGAGTGATGTTTAAGGAGCAAGGACTGAGGGGCTTTTACCGCGGATGGGCACCTACCTTTGTTGGTTACAGCGCACAGGGTGCCTTCAAATATGGATTGTATGAGTACTTCAAGAAGTACTATTCTGACATAGCTGGTCCAGAGTATGCAACGAAGTACAAGACATTGATTTACCTAGCTGGTTCAGCATCTTCGGAGTTGATTGCTGATGTTGCTCTTTGCCCATTTGAGGCTGTGAAGGTCAGAGTTCAAACTCAGCCTGGCTTTGCTAGAGGCCTAGCTGATGGACTTCCAAAGTTAGTCAGAACTGAAGGTGTCTCAGGGCTCTACAAGGGAATTATGCCTCTGTGGGGAAGACAGGTTCCATATACAATGATGAAGTTTGCTTCTTTTGAGAACATAGTTGAGATGATCTACAAGCATGTCATCTCCAAACCAAAATATGAATGCAGCAATTCCCAGCAACTAGGTGTGAGCATTGTCGGTGGATACATGGCTGGTATATTGTGTGCTGTCGTCTCCCATCCCGCTGATAACCTCGTCTCTTTCCTTAACAATTCCAAAGGGGCAAGTGTTGCTGATGCTGTAAAGAAGCTTGGATTATGGGGTTTGTTTACCCGTGGTCTACCTCTTCGTATTCTTATGGTTGGAACTCTCACAGGAGCACAGTGGGGAATATATGATTCATTCAAAGTTTTTGTGGGGCTGCCAACCACTGGTGGTGTTGCTCCTGTTCCTCCTTCACCAGATGCTTAG 1227 0.4645 MSFRRVDFEYIKPAKPKKGFVVKSEQLPDTLQNLISLFQQSKLSLSHTVSLNLSVPATVSPLMAPSDSETLGRHSLIPTFLYSCPSPQQKMEASSFVVRSPSEKRSIEMFSPAFYGACAIGGTLSCGVTHTAVTPLDVVKCNIQIDPVKYKNTSTGFGVMFKEQGLRGFYRGWAPTFVGYSAQGAFKYGLYEYFKKYYSDIAGPEYATKYKTLIYLAGSASSELIADVALCPFEAVKVRVQTQPGFARGLADGLPKLVRTEGVSGLYKGIMPLWGRQVPYTMMKFASFENIVEMIYKHVISKPKYECSNSQQLGVSIVGGYMAGILCAVVSHPADNLVSFLNNSKGASVADAVKKLGLWGLFTRGLPLRILMVGTLTGAQWGIYDSFKVFVGLPTTGGVAPVPPSPDA 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01443 408 ProSiteProfiles Solute carrier (Solcar) repeat profile. 210 294 IPR018108 -
Viun4g01443 408 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 93 400 IPR044677 GO:0005315|GO:1990547
Viun4g01443 408 Pfam Mitochondrial carrier protein 213 298 IPR018108 -
Viun4g01443 408 Pfam Mitochondrial carrier protein 117 199 IPR018108 -
Viun4g01443 408 ProSiteProfiles Solute carrier (Solcar) repeat profile. 311 390 IPR018108 -
Viun4g01443 408 SUPERFAMILY Mitochondrial carrier 117 385 IPR023395 -
Viun4g01443 408 Gene3D Mitochondrial carrier domain 117 391 IPR023395 -
Viun4g01443 408 FunFam Phosphate carrier protein, mitochondrial 113 391 - -
Viun4g01443 408 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 197 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01443 Viun-Chr4 24856801 24860973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01443 74 401 Chloroplast and Mitochondria Gene Families AT3G48850 67.429 1.85e-180 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01443 K15102 - gmx:100804257 624.009