Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01425 ATGGAAAACAACGTGAATGAGAATTCTAGCAGCGTTCCTCAAAAAGAGGAGAACATCAACACTGGCGATACTACTCAGTTGCCGGTTCTGGAATCTGAAGACAAATCCGACGCCAAATCCGATGCCAAACCCGACGCCGAATCCGATGCCAAACCGGAAGCCGAATCCGATGCCAAACCCGAAGCCGAATCCGATACCAAACCCGATGCCAAACCCGAAGCCGAATCCGATGCCAAACCCGAGGGCGAAGCCGACGGCAAACCGGACGGCGAAACTGAAAAGGCCACAGATTCGGAACGAGATACGGAAAAGGAAGAATCCAAAGAGGAGGAGGAAAAGGAAAAGGAAAAAAATGAAGAAGAAAAGGAGGAAACTGTGGAGGCTGAACCGGAATCTCCGATTCCGAGTCTGGAGAAGGTTTTAGATGAGATTGACCAATTTCTCGTGACATTACAACAAAAAGTCGACGCCAAAGAATCAACCCCATTGGAAATCCCTAATTTCATCCCCGTTTTCTTGCATCTGGTGGAACAGAAGATAGTGAAGTACGACACGGGTGAAACGAAATGGGGAGAAACAATTGAAGACGATTCCTCGCTTTTGGGATGCGCGAATCGCGTTTCGAGGCTGATGAACCATTTCATAGAGTACTCGCGGAGTCACGCGGTGGAAGAACAAGAGGAGGGGGAGGAGAAGGTGGTCCGAATAGACTTTATGGTCAACGGCATCAGCGTGATTCAGCAGCGCGTGATGTCGTTTTTGGAAGACGAGTTCCGTACACTGATGGAAGAATCTAGAAATCCAAATAAATCAGACTCAAAGGGGAAACAACAGGCAGACTCCTTAGAGTCCGAGCCATTCGAAGAAAGTATTCTCGAATTCCCAGGTTTCGCCGAGGAAGCCATTGCGAATCTCAACAAAATCGCTAAGGAAATGGTAGCCAGCGGTTACGAAAACGAGTGTAGTCAAGTCTACGCACTTTCGCGGAGGCACGCGTTGGAGGACGGCATGAACAAAATTCTAGGGTATGAGAAACTCAGCATAGACGAGATTCAGAGAATGCAGTGGGAGACACTGGAGCGCGAAATCCCAACATGGATCAACACCTGGAAGGAGTGCACCTCTGTATGGTTCCCCGGCGAGCGAAAGCTTGTGGAAATGGTGTTCGGCAACGAAGCTGACATCGTGGTGGGCCTCATGGGTAACATTTCCCGCTCAATTGTCATTCAGCTGCTTAATTTCGGGGAGAGCATTGCCATGACAAAGCGCGCCGGGGAAAAACTCTTCAAACTCTTAGACATGTACGAGACTCTACGAGACGCCATTCCAATAATGGAGACCTTGTTCCCGGACGACATAATGGGGGAAATCAAGACCGAAACGACATCCGCAAAATGTCGTCTCGGCGAGGCGGCGGTGTTGATATTCTGCGACCTGGAGAATTCGATTAAATCGGAGACTGGAAGAACTCCGGTAGCGGGAGGCGCGGTGCATCCTCTGACACGTTATATCATGAACTACCTAAGGTTAGCGTGTGAGTATAAAGACACATTGGAGGAAGTGTTCAAAGAGCATTCGAAAATCGAGCGTGCGGATTCAACAAGCAGGCCTCGCTATGAAACCGATGACAGCAAATCGAAGAGCGAGAACAGACACAGAGAGGATGAGTCGCCGTTTGCAGCACAATTAATGCGGGTGATGGAGCTTCTGGACTCGAATCTGGAAGGGAAGGCGAAGCTGTACAAAGAGGTTGCGTTGAGCTGCATTTTCATGATGAACAATGGAAGGTACATAGTGCAGAAGATAAAAGGTTCTGCGGAGATCTACGAAGTGATGGGAGAAACGTGGTGTCGTAAGAGATCGACGGAGCTGAGGACATACCACAAGAACTACCAGGTGGAGACGTGGAGCAAGATTTTGAGTTGCCTGAGCCCTAAAGGATTAAGCGATCACGGGAAGGTGCAGAAGCCGGTGTTGAAGGAGCGGTTCAAGGGGTTCAACGCAGGGTTTGAGGAGATCCACAAGACACAGAGCATGTGGGTGGTGAGCGATGAACAGCTTCAATCGGAACTTAGGGTTTCCATTTCTGCACTCGTTATTCCTGCGTACAGATCCTTCTTGGGGAGGTTTTCGCAGTATTTGGATCCGGGGAGACAAACCGAGAAGTATGTAAAGTACCAACCTGAGGATATAGAGGCTTACATTGACGATTTGTTCGATGGGAATGCACACGCGCGTCGCTAG 2244 0.4933 MENNVNENSSSVPQKEENINTGDTTQLPVLESEDKSDAKSDAKPDAESDAKPEAESDAKPEAESDTKPDAKPEAESDAKPEGEADGKPDGETEKATDSERDTEKEESKEEEEKEKEKNEEEKEETVEAEPESPIPSLEKVLDEIDQFLVTLQQKVDAKESTPLEIPNFIPVFLHLVEQKIVKYDTGETKWGETIEDDSSLLGCANRVSRLMNHFIEYSRSHAVEEQEEGEEKVVRIDFMVNGISVIQQRVMSFLEDEFRTLMEESRNPNKSDSKGKQQADSLESEPFEESILEFPGFAEEAIANLNKIAKEMVASGYENECSQVYALSRRHALEDGMNKILGYEKLSIDEIQRMQWETLEREIPTWINTWKECTSVWFPGERKLVEMVFGNEADIVVGLMGNISRSIVIQLLNFGESIAMTKRAGEKLFKLLDMYETLRDAIPIMETLFPDDIMGEIKTETTSAKCRLGEAAVLIFCDLENSIKSETGRTPVAGGAVHPLTRYIMNYLRLACEYKDTLEEVFKEHSKIERADSTSRPRYETDDSKSKSENRHREDESPFAAQLMRVMELLDSNLEGKAKLYKEVALSCIFMMNNGRYIVQKIKGSAEIYEVMGETWCRKRSTELRTYHKNYQVETWSKILSCLSPKGLSDHGKVQKPVLKERFKGFNAGFEEIHKTQSMWVVSDEQLQSELRVSISALVIPAYRSFLGRFSQYLDPGRQTEKYVKYQPEDIEAYIDDLFDGNAHARR 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01425 747 Gene3D Exocyst complex component Exo70 190 747 - -
Viun4g01425 747 Pfam Exo70 exocyst complex subunit 366 737 IPR046364 GO:0000145|GO:0005546|GO:0006887
Viun4g01425 747 MobiDBLite consensus disorder prediction 529 557 - -
Viun4g01425 747 Coils Coil 99 129 - -
Viun4g01425 747 PANTHER EXOCYST COMPLEX PROTEIN EXO70 138 741 IPR004140 GO:0000145|GO:0006887
Viun4g01425 747 MobiDBLite consensus disorder prediction 30 122 - -
Viun4g01425 747 MobiDBLite consensus disorder prediction 1 29 - -
Viun4g01425 747 FunFam Exocyst subunit Exo70 family protein 184 747 - -
Viun4g01425 747 MobiDBLite consensus disorder prediction 263 283 - -
Viun4g01425 747 SUPERFAMILY Cullin repeat-like 199 740 IPR016159 -
Viun4g01425 747 MobiDBLite consensus disorder prediction 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01425 Viun-Chr4 24305797 24308369 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01425 55 747 EXO70 exocyst subunit family AT5G13990 48.700 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01425 K07195 - gmx:100819960 923.309