Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01422 ATGGCTGCCAACACATTGATGAGCTCTGCTATCACAGCCTTCCCTTCTCTCCTTTCTTCCTCAAAATCAAGGTTTGCCTCTGCAGTTCCCATTTCCAGCTTTGCCACCAATGCCTCTTCTAGGTTTTCCATGACTGCTGATTGGATGCCTGGCCAGCCTAGACCCCCTTATCTTGATGGTTCAGCACCAGGTGATTTTGGATTCGACCCTCTTCGTCTTGGTGAAGTGCCAGAGAATCTTGAGAGGTTCAAAGAATCAGAACTCATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTTCCAGAGGCATTGGGCTTAGGAAACTGGGTAAAGGCTCAGGAATGGGCTGCAGTTCCTGGGGGCCAAGCTACCTACCTAGGCAACCCAGTTCCATGGGGCACACTACCCACGATTCTTGTCATTGAATTCCTTGCTATTTCCTTTGTGGAGCACCAAAGGAGCATGGAGAAAGACCCAGAGAAGAAGAAATACCCTGGTGGTGCTTTTGATCCTTTGGGATACTCCAAGGACCCTAAAGCATTCCATGAATACAAAGTCAAAGAACTTAAGAATGGACGTCTTGCTTTGTTGGCTTTTGTGGGATTCTGTGTTCAACAATCAGCTTATCCTGGAACTGGACCTTTGGAGAACTTGGCAACTCACTTGGCTGACCCATGGCACAACAACATCGGAAACATCATTATTCCACAATCGATTTTGCCTTGA 735 0.4762 MAANTLMSSAITAFPSLLSSSKSRFASAVPISSFATNASSRFSMTADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGNPVPWGTLPTILVIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKAFHEYKVKELKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGNIIIPQSILP 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01422 244 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 35 236 IPR001344 GO:0009765|GO:0016020
Viun4g01422 244 FunFam Chlorophyll a-b binding protein, chloroplastic 49 235 - -
Viun4g01422 244 SUPERFAMILY Chlorophyll a-b binding protein 38 238 - -
Viun4g01422 244 Pfam Chlorophyll A-B binding protein 55 209 IPR022796 -
Viun4g01422 244 Gene3D Chlorophyll a/b binding protein domain 49 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01422 Viun-Chr4 24229280 24231150 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01422 1 196 Chloroplast and Mitochondria Gene Families AT3G54890 81.313 3.10e-106 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01422 K08907 - gmx:100305992 474.937