Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01412 ATGCGAATGAGTTGTAATGGGTGTCGTGTGTTGCGAAAAGGGTGCAGTGAAGATTGTAGCATAAGACCGTGTTTGGAATGGATCAAGAACCCAGAATCGCAGGCTAATGCCACCGTTTTTCTTGCTAAGTTCTATGGTCGTGCTGGCCTCATGAATCTCATCAACGCGGGCCCTCAAAACCTCCGACCAGCGATTTTTCGTTCGTTGTTGTACGAGGCATGTGGTCGAATTGTAAACCCAATTTACGGGTCAGTGGGTTTGTTATGGTCGGGGAGCTGGCAGCTGTGTCAAGCCGCCGTGGAAGCCGTTTTGAAAGGCGAGCCGATCACACCGATCACATCGGAAGTGGCGGCGAATGGGCGGGCCCCACCTCTGAAGGCATGCGACATTCGCCACGTGTCCAAAGACGAAAACTCGGCGAACCGGACTCAAAAGGCCAAGACTCGAGTCCGGGTTAAGCGAACCGGCGGCGACGTAGTTATCAAACCGAAAGCCTCGAAGGCGACTGGGTTTGTTCCGGTTGAACCGGAGGCGAACCAGACTACGAGTCATGAGTCGGGGCTGAGCCACTTGTCGGAAGCGGCGGCCATTGTGGAAGGAGAGAGCAAAGAGAGTGAAAGTGTGGTGTCGGTGGAAACTTGCAACCTATTCGGTGAGACAAAGACGAGTGATCGAACCGGTGAAAGTAGTGATGAAATTGGTTTGGAATTGAGGCTTGGGTTTGAACCGGTTTCACGTGAGCATCACATGATTCCGATGAAGAAGAGAAGAATAGAAGTGAAAAGTAGCTGTGACTCAATGGAGTTAGGACTTGAGTCCTCGGCTTGA 828 0.5193 MRMSCNGCRVLRKGCSEDCSIRPCLEWIKNPESQANATVFLAKFYGRAGLMNLINAGPQNLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGEPITPITSEVAANGRAPPLKACDIRHVSKDENSANRTQKAKTRVRVKRTGGDVVIKPKASKATGFVPVEPEANQTTSHESGLSHLSEAAAIVEGESKESESVVSVETCNLFGETKTSDRTGESSDEIGLELRLGFEPVSREHHMIPMKKRRIEVKSSCDSMELGLESSA 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01412 275 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 238 - -
Viun4g01412 275 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Viun4g01412 275 PIRSF AS2 1 274 IPR017414 -
Viun4g01412 275 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01412 Viun-Chr4 23847440 23849104 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01412 1 264 AS2 family AT3G02550 60.674 1.07e-106 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Viun4g01412 LOB 9.3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01412 - - gmx:100814175 437.187